C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich coiled-coil 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024393 Prrc2a 10090 - 17:35149076-35164897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025253 Prrc2a-001 35149076-35164897 protein_coding
  ENSMUST00000172899 Prrc2a-006 35150333-35150952 retained_intron
  ENSMUST00000172929 Prrc2a-004 35157133-35164835 processed_transcript
  ENSMUST00000173558 Prrc2a-007 35149177-35150366 retained_intron
  ENSMUST00000174386 Prrc2a-005 35152201-35153259 retained_intron
  ENSMUST00000174805 Prrc2a-002 35149088-35162969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025253ENSMUST00000173558ENSMUST00000174805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025253 26.363±6.55 44.616±5.67 18.644±3.69 40.921±14.62 24.119±15.18 27.077±6.29 14.050±2.00 17.053±1.00 10.736±4.06 25.024±4.73 15.491±2.75 41.228±12.85 29.990±14.99 60.581±15.74
ENSMUST00000173558 N/A N/A 46.941±2.22 N/A 75.395±0.00 69.321±8.04 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174805 8.135±0.88 8.724±0.68 6.418±0.00 13.389±1.55 8.824±0.32 7.721±0.00 4.135±0.25 3.386±0.00 3.936±1.18 6.748±0.50 N/A 19.170±7.55 13.949±9.63 30.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031494 prrc2a proline-rich coiled-coil 2A protein_coding Danio_rerio
ENSG00000204469 PRRC2A proline-rich coiled-coil 2A protein_coding Homo_sapiens

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