C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025253 Prrc2a-001 ENSMUSG00000024393 10090 - 17:35149076-35164897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025253
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025253 26.363±6.55 44.616±5.67 18.644±3.69 40.921±14.62 24.119±15.18 27.077±6.29 14.050±2.00 17.053±1.00 10.736±4.06 25.024±4.73 15.491±2.75 41.228±12.85 29.990±14.99 60.581±15.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000138675 prrc2a-001 protein_coding Danio_rerio 0 383
ENSDART00000043776 prrc2a-201 protein_coding Danio_rerio 0 348
ENST00000376007 PRRC2A-001 protein_coding Homo_sapiens 0 8046
ENST00000376033 PRRC2A-002 protein_coding Homo_sapiens 0 7882
ENST00000383455 PRRC2A-002 protein_coding Homo_sapiens 0 7899
ENST00000383464 PRRC2A-001 protein_coding Homo_sapiens 0 8063
ENST00000414956 PRRC2A-002 protein_coding Homo_sapiens 0 7899
ENST00000416335 PRRC2A-002 protein_coding Homo_sapiens 0 7904
ENST00000422962 PRRC2A-002 protein_coding Homo_sapiens 0 7899
ENST00000428775 PRRC2A-002 protein_coding Homo_sapiens 0 7904
ENST00000430737 PRRC2A-001 protein_coding Homo_sapiens 0 8063
ENST00000432252 PRRC2A-002 protein_coding Homo_sapiens 0 7904
ENST00000435971 PRRC2A-001 protein_coding Homo_sapiens 0 8069
ENST00000439762 PRRC2A-001 protein_coding Homo_sapiens 0 8069
ENST00000454306 PRRC2A-001 protein_coding Homo_sapiens 0 8069
ENST00000458561 PRRC2A-001 protein_coding Homo_sapiens 0 8063
ENST00000459823 PRRC2A-011 retained_intron Homo_sapiens 0 422
ENST00000460302 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000460691 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000461355 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000462141 PRRC2A-012 retained_intron Homo_sapiens 0 654
ENST00000462508 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000462547 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000462617 PRRC2A-011 retained_intron Homo_sapiens 0 416
ENST00000463767 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000464079 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000464106 PRRC2A-009 retained_intron Homo_sapiens 0 497
ENST00000464400 PRRC2A-011 retained_intron Homo_sapiens 0 422
ENST00000464692 PRRC2A-009 retained_intron Homo_sapiens 0 492
ENST00000464841 PRRC2A-010 retained_intron Homo_sapiens 0 870
ENST00000464890 PRRC2A-004 retained_intron Homo_sapiens 0 394
ENST00000465869 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000466203 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000466339 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000466607 PRRC2A-003 processed_transcript Homo_sapiens 0 1262
ENST00000467770 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000467947 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000468007 PRRC2A-010 retained_intron Homo_sapiens 0 870
ENST00000468109 PRRC2A-010 retained_intron Homo_sapiens 0 876
ENST00000468585 PRRC2A-012 retained_intron Homo_sapiens 0 649
ENST00000468994 PRRC2A-003 processed_transcript Homo_sapiens 0 1262
ENST00000469577 PRRC2A-003 processed_transcript Homo_sapiens 0 1256
ENST00000469943 PRRC2A-007 retained_intron Homo_sapiens 0 412
ENST00000470109 PRRC2A-003 processed_transcript Homo_sapiens 0 1262
ENST00000470224 PRRC2A-007 retained_intron Homo_sapiens 0 407
ENST00000471879 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000473148 PRRC2A-012 retained_intron Homo_sapiens 0 654
ENST00000473169 PRRC2A-003 processed_transcript Homo_sapiens 0 1256
ENST00000474452 PRRC2A-009 retained_intron Homo_sapiens 0 497
ENST00000474679 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000474943 PRRC2A-007 retained_intron Homo_sapiens 0 407
ENST00000476928 PRRC2A-011 retained_intron Homo_sapiens 0 422
ENST00000478634 PRRC2A-011 retained_intron Homo_sapiens 0 416
ENST00000478637 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000479277 PRRC2A-012 retained_intron Homo_sapiens 0 654
ENST00000480541 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000481184 PRRC2A-007 retained_intron Homo_sapiens 0 412
ENST00000481993 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000482441 PRRC2A-012 retained_intron Homo_sapiens 0 649
ENST00000483470 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000484138 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000484613 PRRC2A-003 processed_transcript Homo_sapiens 0 1262
ENST00000484787 PRRC2A-007 retained_intron Homo_sapiens 0 412
ENST00000484832 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000485195 PRRC2A-003 processed_transcript Homo_sapiens 0 1262
ENST00000486537 PRRC2A-007 retained_intron Homo_sapiens 0 407
ENST00000487457 PRRC2A-009 retained_intron Homo_sapiens 0 486
ENST00000487839 PRRC2A-009 retained_intron Homo_sapiens 0 486
ENST00000487905 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000488326 PRRC2A-012 retained_intron Homo_sapiens 0 654
ENST00000489811 PRRC2A-010 retained_intron Homo_sapiens 0 870
ENST00000492415 PRRC2A-010 retained_intron Homo_sapiens 0 876
ENST00000492691 PRRC2A-010 retained_intron Homo_sapiens 0 870
ENST00000493561 PRRC2A-004 retained_intron Homo_sapiens 0 399
ENST00000494331 PRRC2A-011 retained_intron Homo_sapiens 0 416
ENST00000495051 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000495151 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000496033 PRRC2A-006 retained_intron Homo_sapiens 0 292
ENST00000496185 PRRC2A-011 retained_intron Homo_sapiens 0 422
ENST00000496449 PRRC2A-010 retained_intron Homo_sapiens 0 870
ENST00000496475 PRRC2A-013 retained_intron Homo_sapiens 0 322
ENST00000496540 PRRC2A-009 retained_intron Homo_sapiens 0 492
ENST00000497052 PRRC2A-012 retained_intron Homo_sapiens 0 649
ENST00000498001 PRRC2A-009 retained_intron Homo_sapiens 0 497
ENST00000498465 PRRC2A-005 retained_intron Homo_sapiens 0 558
ENST00000498585 PRRC2A-007 retained_intron Homo_sapiens 0 412
ENST00000524591 KIAA1456-008 protein_coding Homo_sapiens 0 222

Loading