C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and KH domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024483 Ankhd1 10090 + 18:36559987-36665917 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006205 Ankhd1-001 36560611-36658908 nonsense_mediated_decay
  ENSMUST00000037072 Ankhd1-016 36644298-36658913 protein_coding
  ENSMUST00000116653 Ankhd1-017 36655510-36658810 protein_coding
  ENSMUST00000130035 Ankhd1-009 36638324-36642988 nonsense_mediated_decay
  ENSMUST00000134146 Ankhd1-004 36559987-36583681 protein_coding
  ENSMUST00000136030 Ankhd1-007 36613909-36634357 protein_coding
  ENSMUST00000140061 Ankhd1-018 36647860-36665917 protein_coding
  ENSMUST00000142780 Ankhd1-006 36606193-36634369 processed_transcript
  ENSMUST00000142977 Ankhd1-015 36560678-36665917 nonsense_mediated_decay
  ENSMUST00000143966 Ankhd1-013 36581077-36583992 retained_intron
  ENSMUST00000152060 Ankhd1-005 36600800-36625022 protein_coding
  ENSMUST00000152940 Ankhd1-011 36641373-36644270 retained_intron
  ENSMUST00000153612 Ankhd1-010 36638548-36642994 nonsense_mediated_decay
  ENSMUST00000155329 Ankhd1-014 36560611-36658908 protein_coding
  ENSMUST00000156424 Ankhd1-008 36614312-36624612 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037072ENSMUST00000140061ENSMUST00000142977ENSMUST00000152060ENSMUST00000152940ENSMUST00000155329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037072 6.441±2.21 7.285±1.94 5.207±0.60 10.330±1.98 12.397±4.85 11.498±1.19 4.482±0.74 6.152±1.84 3.800±1.16 7.188±2.43 1.893±0.31 11.675±5.55 3.731±0.36 6.503±1.42
ENSMUST00000140061 7.653±1.65 5.360±0.64 10.876±1.91 7.553±1.43 8.398±2.65 N/A 3.877±0.22 8.768±1.57 5.975±2.15 7.015±0.69 4.459±1.05 8.665±2.46 8.197±1.41 5.905±0.40
ENSMUST00000142977 N/A N/A 2.967±1.74 1.933±0.06 N/A N/A 1.182±0.00 N/A 4.660±2.71 N/A 1.239±0.44 8.117±0.42 3.238±1.07 2.215±1.03
ENSMUST00000152060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.993±0.00 20.776±6.72 41.241±0.00
ENSMUST00000152940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 128.283±0.00
ENSMUST00000155329 2.113±0.56 5.140±1.16 2.077±0.00 5.371±1.82 N/A 8.179±0.76 2.010±0.82 3.111±1.18 2.843±0.71 5.687±0.54 0.813±0.22 4.978±1.88 2.660±0.40 1.696±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZO CIL_0006ZO_0002 CGP 18:36528157-36665917

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077860 ankhd1 ankyrin repeat and KH domain containing 1 protein_coding Danio_rerio
ENSG00000131503 ANKHD1 ankyrin repeat and KH domain containing 1 protein_coding Homo_sapiens
ENSG00000254996 ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough protein_coding Homo_sapiens

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