C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and KH domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131503 ANKHD1 9606 + 5:140401814-140539856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246149 ANKHD1-006 140459257-140524133 protein_coding
  ENST00000297183 ANKHD1-201 140401814-140539418 protein_coding
  ENST00000360839 ANKHD1-001 140401814-140539856 protein_coding
  ENST00000394722 ANKHD1-005 140401921-140472477 protein_coding
  ENST00000394723 ANKHD1-004 140401854-140472477 protein_coding
  ENST00000412116 ANKHD1-007 140482580-140524115 protein_coding
  ENST00000421134 ANKHD1-003 140401850-140526142 protein_coding
  ENST00000421706 ANKHD1-002 140537389-140539342 protein_coding
  ENST00000431508 ANKHD1-008 140510110-140539849 protein_coding
  ENST00000432301 ANKHD1-013 140526153-140539849 protein_coding
  ENST00000433049 ANKHD1-011 140524183-140539848 protein_coding
  ENST00000435794 ANKHD1-012 140526033-140539856 protein_coding
  ENST00000462121 ANKHD1-016 140496650-140498190 processed_transcript
  ENST00000465435 ANKHD1-015 140484760-140486076 retained_intron
  ENST00000475148 ANKHD1-017 140529630-140535904 retained_intron
  ENST00000490185 ANKHD1-014 140458733-140465173 retained_intron
  ENST00000495578 ANKHD1-018 140537049-140538262 retained_intron
  ENST00000506755 ANKHD1-021 140486567-140496547 retained_intron
  ENST00000506930 ANKHD1-022 140504769-140509669 retained_intron
  ENST00000511151 ANKHD1-020 140401856-140445974 protein_coding
  ENST00000616482 ANKHD1-202 140401814-140472476 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297183ENST00000360839ENST00000394722ENST00000394723ENST00000412116ENST00000421134ENST00000431508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297183 6.116±0.00 N/A N/A 3.872±0.00 N/A N/A N/A N/A N/A N/A N/A 4.419±0.00 N/A N/A
ENST00000360839 N/A N/A 2.540±0.00 2.344±0.00 2.484±0.00 N/A 1.152±0.00 3.249±0.00 N/A 2.652±0.00 2.277±0.00 4.016±0.00 N/A N/A
ENST00000394722 N/A N/A N/A N/A 9.647±0.00 N/A N/A N/A N/A N/A 5.419±0.00 N/A N/A N/A
ENST00000394723 N/A N/A N/A 9.586±0.00 N/A 19.026±0.00 5.653±0.00 12.725±0.00 N/A N/A N/A 13.773±0.00 N/A N/A
ENST00000412116 N/A N/A N/A N/A 16.768±0.00 N/A 5.720±0.00 N/A 25.883±0.00 18.999±0.00 N/A N/A N/A N/A
ENST00000421134 N/A N/A 3.160±0.00 N/A 4.037±0.00 7.189±0.00 N/A N/A 6.691±0.00 4.961±0.00 N/A 6.854±0.00 8.983±0.00 10.324±0.00
ENST00000431508 10.333±0.00 18.748±0.00 N/A 5.675±0.00 19.304±0.00 15.823±0.00 N/A 15.613±0.00 9.615±0.00 12.179±0.00 N/A 22.639±0.00 N/A 20.581±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZO CIL_0006ZO_0001 CGP 5:140360202-140539856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077860 ankhd1 ankyrin repeat and KH domain containing 1 protein_coding Danio_rerio
ENSMUSG00000024483 Ankhd1 ankyrin repeat and KH domain containing 1 protein_coding Mus_musculus

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