C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysyl oxidase-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025185 Loxl4 10090 - 19:42593982-42612813 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026190 Loxl4-001 42593982-42612813 protein_coding
  ENSMUST00000164014 Loxl4-003 42601553-42603321 processed_transcript
  ENSMUST00000164786 Loxl4-004 42595106-42612813 protein_coding
  ENSMUST00000166128 Loxl4-002 42607609-42612772 protein_coding
  ENSMUST00000171432 Loxl4-201 42595334-42608531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026190ENSMUST00000164014ENSMUST00000164786ENSMUST00000171432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026190 0.388±0.18 0.568±0.07 0.801±0.00 0.066±0.01 0.507±0.04 0.663±0.20 0.203±0.05 0.604±0.10 0.539±0.39 0.590±0.01 0.050±0.01 0.571±0.25 0.651±0.17 0.137±0.04
ENSMUST00000164014 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164786 N/A 0.138±0.00 N/A N/A 0.459±0.12 N/A 0.128±0.00 0.660±0.05 0.557±0.00 0.173±0.00 N/A 0.421±0.08 N/A 0.041±0.00
ENSMUST00000171432 0.206±0.00 N/A N/A N/A N/A 0.481±0.16 0.113±0.04 N/A 0.158±0.21 0.317±0.06 0.144±0.00 0.618±0.01 N/A 0.117±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054Z CIL_00054Z_0002 CGP 19:42518759-42612813
CIL_00054Y CIL_00054Y_0002 CGP 19:42593982-42752775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004720 IDA protein-lysine 6-oxidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0043235 ISO receptor complex
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025089 loxl4 lysyl oxidase-like 4 protein_coding Danio_rerio
ENSG00000138131 LOXL4 lysyl oxidase-like 4 protein_coding Homo_sapiens

Loading