C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00054Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166024-ENSG00000138131 CGP 9606 10:98134624-98268250
GeneTranscriptPositionBiotype
ENSG00000138131 (LOXL4)
lysyl oxidase-like 4
ENST00000260702 (LOXL4-001) 98247690-98268250 protein_coding
ENSG00000166024 (R3HCC1L)
R3H domain and coiled-coil containing 1-like
ENST00000298999 (R3HCC1L-001) 98134671-98244897 protein_coding
ENST00000314594 (R3HCC1L-201) 98163287-98244894 protein_coding
ENST00000370584 (R3HCC1L-202) 98134624-98244894 protein_coding
ENST00000370586 (R3HCC1L-002) 98162883-98244349 protein_coding
ENST00000612478 (R3HCC1L-203) 98163287-98244894 protein_coding
ENST00000613938 (R3HCC1L-204) 98163287-98244892 protein_coding
ENSG00000230928 (RP11-34A14.3)
ENST00000433374 (RP11-34A14.3-001) 98252023-98256575 antisense
CIL_00054Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025184-ENSMUSG00000025185 CGP 10090 19:42518759-42612813
GeneTranscriptPositionBiotype
ENSMUSG00000025184 (R3hcc1l)
R3H domain and coiled-coil containing 1 like
ENSMUST00000026188 (R3hcc1l-001) 42518759-42592343 protein_coding
ENSMUST00000160107 (R3hcc1l-003) 42518798-42591010 protein_coding
ENSMUST00000160893 (R3hcc1l-004) 42518822-42576100 protein_coding
ENSMUST00000161422 (R3hcc1l-005) 42564241-42576665 retained_intron
ENSMUST00000162238 (R3hcc1l-002) 42581161-42584771 retained_intron
ENSMUSG00000025185 (Loxl4)
lysyl oxidase-like 4
ENSMUST00000026190 (Loxl4-001) 42593982-42612813 protein_coding
ENSMUST00000164014 (Loxl4-003) 42601553-42603321 processed_transcript
ENSMUST00000164786 (Loxl4-004) 42595106-42612813 protein_coding
ENSMUST00000166128 (Loxl4-002) 42607609-42612772 protein_coding
ENSMUST00000171432 (Loxl4-201) 42595334-42608531 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054Z_0001ENSG00000138131ENST00000260702ENSG00000166024ENST00000298999ENST00000314594ENST00000370584ENST00000370586ENST00000612478ENST00000613938ENSG00000230928ENST00000433374CIL_00054Z_0002ENSMUSG00000025184ENSMUST00000026188ENSMUST00000160107ENSMUST00000160893ENSMUST00000161422ENSMUST00000162238ENSMUSG00000025185ENSMUST00000026190ENSMUST00000164014ENSMUST00000164786ENSMUST00000166128ENSMUST00000171432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054Z_0001ENSG00000138131ENST00000260702ENSG00000166024ENST00000298999ENST00000314594ENST00000370584ENST00000612478ENST00000613938ENSG00000230928ENST00000433374CIL_00054Z_0002ENSMUSG00000025184ENSMUST00000026188ENSMUST00000160107ENSMUST00000162238ENSMUSG00000025185ENSMUST00000026190ENSMUST00000164014ENSMUST00000164786ENSMUST00000171432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138131 ENST00000260702 2.852±0.00 1.390±0.00 0.228±0.00 0.306±0.26 3.106±2.90 3.551±0.00 0.117±0.00 1.375±1.24 0.565±0.00 2.029±1.32 3.820±0.00 1.885±1.71 4.597±0.56 3.992±0.47
ENSG00000166024 ENST00000298999 0.976±0.00 1.209±0.00 N/A 0.715±0.12 N/A 1.188±0.38 0.538±0.00 N/A 0.852±0.63 0.438±0.00 0.277±0.00 1.387±0.46 0.457±0.12 3.012±0.00
ENST00000314594 1.252±0.00 N/A N/A 1.000±0.00 0.775±0.19 1.506±0.64 0.549±0.00 2.073±0.00 0.530±0.00 2.583±0.83 0.684±0.00 1.050±0.55 0.706±0.14 5.565±2.38
ENST00000370584 N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 0.742±0.00 N/A 0.701±0.00 0.565±0.15 1.558±0.00
ENST00000370586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612478 N/A 0.814±0.00 N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613938 0.876±0.00 3.946±0.00 N/A N/A 1.116±0.00 0.936±0.00 N/A 3.648±0.00 1.402±0.00 N/A 0.812±0.00 2.002±1.19 1.131±0.01 5.618±0.00
ENSG00000230928 ENST00000433374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.891±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025184 ENSMUST00000026188 2.573±0.21 0.750±0.31 4.417±0.06 2.162±0.93 2.470±0.26 1.258±0.40 1.410±0.19 1.977±0.35 2.593±1.27 3.081±0.65 1.816±0.20 2.994±0.81 3.519±1.20 2.673±0.46
ENSMUST00000160107 N/A N/A 5.509±0.00 4.310±0.80 N/A N/A N/A 2.022±0.00 4.430±0.73 N/A 1.481±0.28 12.372±4.12 5.199±1.92 13.410±0.00
ENSMUST00000160893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162238 N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A 0.401±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000025185 ENSMUST00000026190 0.388±0.18 0.568±0.07 0.801±0.00 0.066±0.01 0.507±0.04 0.663±0.20 0.203±0.05 0.604±0.10 0.539±0.39 0.590±0.01 0.050±0.01 0.571±0.25 0.651±0.17 0.137±0.04
ENSMUST00000164014 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164786 N/A 0.138±0.00 N/A N/A 0.459±0.12 N/A 0.128±0.00 0.660±0.05 0.557±0.00 0.173±0.00 N/A 0.421±0.08 N/A 0.041±0.00
ENSMUST00000166128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171432 0.206±0.00 N/A N/A N/A N/A 0.481±0.16 0.113±0.04 N/A 0.158±0.21 0.317±0.06 0.144±0.00 0.618±0.01 N/A 0.117±0.00

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