C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025393 Atp5b 10090 + 10:128083273-128090391 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026459 Atp5b-001 128083273-128090391 protein_coding
  ENSMUST00000123803 Atp5b-008 128088491-128089681 retained_intron
  ENSMUST00000124993 Atp5b-006 128086230-128089152 processed_transcript
  ENSMUST00000125992 Atp5b-004 128089041-128090272 processed_transcript
  ENSMUST00000126040 Atp5b-005 128085746-128090160 retained_intron
  ENSMUST00000126751 Atp5b-009 128088552-128090273 processed_transcript
  ENSMUST00000127439 Atp5b-002 128083306-128084086 processed_transcript
  ENSMUST00000139295 Atp5b-003 128084433-128085949 retained_intron
  ENSMUST00000144918 Atp5b-007 128087681-128089051 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026459ENSMUST00000124993ENSMUST00000126040ENSMUST00000127439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026459 491.414±95.53 297.659±16.08 417.065±0.00 281.745±145.32 439.672±166.96 312.079±7.94 1951.605±22.16 973.287±145.36 637.340±211.25 199.064±51.01 886.955±192.11 290.162±122.19 450.699±143.55 197.093±48.33
ENSMUST00000124993 N/A N/A N/A 292.686±0.00 398.855±0.00 N/A N/A N/A N/A N/A N/A 208.558±0.00 281.296±47.70 N/A
ENSMUST00000126040 650.898±142.87 1210.995±39.66 N/A 174.409±21.16 897.212±228.95 837.399±121.92 989.269±372.68 1277.446±412.04 550.208±69.10 268.977±41.94 N/A 620.151±90.90 N/A 156.002±36.32
ENSMUST00000127439 N/A 2303.735±708.34 N/A N/A 1630.950±104.97 1102.331±117.32 N/A 1408.060±0.00 498.997±18.03 386.961±52.23 N/A 875.916±116.29 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001649 IEA osteoblast differentiation
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006629 IMP lipid metabolic process
GO:0006754 IEA ATP biosynthetic process
GO:0006933 IMP negative regulation of cell adhesion involved in substrate-bound cell migration
GO:0009986 IEA cell surface
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0031966 IEA mitochondrial membrane
GO:0042288 IEA MHC class I protein binding
GO:0042645 IEA mitochondrial nucleoid
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0051453 IEA regulation of intracellular pH
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070083 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide protein_coding Danio_rerio
ENSG00000110955 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide protein_coding Homo_sapiens

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