C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026459 Atp5b-001 ENSMUSG00000025393 10090 + 10:128083273-128090391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026459 491.414±95.53 297.659±16.08 417.065±0.00 281.745±145.32 439.672±166.96 312.079±7.94 1951.605±22.16 973.287±145.36 637.340±211.25 199.064±51.01 886.955±192.11 290.162±122.19 450.699±143.55 197.093±48.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001649 IEA osteoblast differentiation
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006629 IMP lipid metabolic process
GO:0006754 IEA ATP biosynthetic process
GO:0006933 IMP negative regulation of cell adhesion involved in substrate-bound cell migration
GO:0009986 IEA cell surface
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0031966 IEA mitochondrial membrane
GO:0042288 IEA MHC class I protein binding
GO:0042645 IEA mitochondrial nucleoid
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0051453 IEA regulation of intracellular pH
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262030 ATP5B-201 protein_coding Homo_sapiens 0 2032
ENST00000411980 ATP5BP1-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000547250 ATP5B-012 processed_transcript Homo_sapiens 0 743
ENST00000547808 ATP5B-005 processed_transcript Homo_sapiens 0 553
ENST00000548474 ATP5B-007 processed_transcript Homo_sapiens 0 274
ENST00000548647 ATP5B-008 processed_transcript Homo_sapiens 0 544
ENST00000551020 ATP5B-003 protein_coding Homo_sapiens 0 686
ENST00000551182 ATP5B-013 processed_transcript Homo_sapiens 0 420
ENST00000551570 ATP5B-010 protein_coding Homo_sapiens 0 263
ENST00000552959 ATP5B-004 protein_coding Homo_sapiens 0 1273
ENST00000553007 ATP5B-009 protein_coding Homo_sapiens 0 660

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