C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 0610011F06 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025731 0610011F06Rik 10090 + 17:25875464-25886007 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026827 0610011F06Rik-001 25875500-25877169 protein_coding
  ENSMUST00000110456 0610011F06Rik-005 25875464-25877160 nonsense_mediated_decay
  ENSMUST00000163356 0610011F06Rik-002 25875530-25886007 protein_coding
  ENSMUST00000169085 0610011F06Rik-003 25875530-25876997 protein_coding
  ENSMUST00000169308 0610011F06Rik-006 25875501-25877169 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026827ENSMUST00000110456ENSMUST00000163356ENSMUST00000169308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026827 23.613±2.81 172.563±48.25 45.344±12.96 15.574±5.35 46.155±23.60 162.385±12.00 9.507±2.30 235.312±52.65 132.700±86.75 45.955±10.79 12.622±2.55 92.005±39.73 32.174±13.78 18.760±4.61
ENSMUST00000110456 N/A N/A N/A 1.980±0.00 N/A N/A N/A N/A N/A N/A N/A 5.877±0.00 N/A 5.147±1.20
ENSMUST00000163356 13.329±4.89 149.482±57.11 N/A 16.770±0.00 20.330±2.39 N/A N/A 69.553±18.16 50.931±5.07 N/A N/A 30.320±0.00 18.314±1.19 8.979±0.96
ENSMUST00000169308 5.049±0.97 32.013±0.00 9.712±1.28 11.320±2.06 9.745±1.79 18.762±0.36 3.453±0.66 39.241±5.48 8.385±1.55 5.414±0.88 7.665±1.52 13.331±4.02 11.338±1.45 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027461 C3H16orf13 chromosome 16 open reading frame 13 protein_coding Danio_rerio
ENSG00000130731 C16orf13 chromosome 16 open reading frame 13 protein_coding Homo_sapiens

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