C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 0610011F06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169308 0610011F06Rik-006 ENSMUSG00000025731 10090 + 17:25875501-25877169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000169308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000169308 5.049±0.97 32.013±0.00 9.712±1.28 11.320±2.06 9.745±1.79 18.762±0.36 3.453±0.66 39.241±5.48 8.385±1.55 5.414±0.88 7.665±1.52 13.331±4.02 11.338±1.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301686 C16orf13-002 protein_coding Homo_sapiens 0 592
ENST00000329335 RP1L1-002 processed_transcript Homo_sapiens 0.0000002 62
ENST00000336111 OGFOD1-002 nonsense_mediated_decay Homo_sapiens 0.000000000009 77
ENST00000338401 C16orf13-003 protein_coding Homo_sapiens 4.06377e-44 182
ENST00000353231 CLEC7A-001 protein_coding Homo_sapiens 0.0000003 62
ENST00000369940 IRAK1BP1-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000382040 RSAD2-001 protein_coding Homo_sapiens 0.000001 60
ENST00000392869 GTDC1-001 protein_coding Homo_sapiens 0.0000003 64
ENST00000397664 C16orf13-012 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000397665 C16orf13-004 protein_coding Homo_sapiens 0 313
ENST00000397666 C16orf13-001 protein_coding Homo_sapiens 0 394
ENST00000397802 POLR3D-001 protein_coding Homo_sapiens 0.0000006 62
ENST00000409612 PLEKHB2-004 protein_coding Homo_sapiens 0.00000002 66
ENST00000413543 JADE1-001 protein_coding Homo_sapiens 0.000002 60
ENST00000420643 MAPKAP1-005 protein_coding Homo_sapiens 0.0000001 62
ENST00000424445 PPIL6-201 protein_coding Homo_sapiens 0.000002 60
ENST00000448973 C16orf13-008 retained_intron Homo_sapiens 0 200
ENST00000456420 C16orf13-011 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000468856 RASGRP3-005 retained_intron Homo_sapiens 0.0000001 64
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0.0000005 62
ENST00000470442 PPIL3-014 retained_intron Homo_sapiens 0.0000003 60
ENST00000474550 NPAS2-002 retained_intron Homo_sapiens 0.0000009 62
ENST00000482731 RASGRP3-020 processed_transcript Homo_sapiens 0.00000002 64
ENST00000487980 PLEKHB2-009 processed_transcript Homo_sapiens 0.000000005 66
ENST00000504295 COPB2-003 retained_intron Homo_sapiens 0.0000004 62
ENST00000504388 SKIV2L2-004 processed_transcript Homo_sapiens 0.0000002 60
ENST00000521072 PPIL6-001 protein_coding Homo_sapiens 0.000002 60
ENST00000534609 CLEC7A-005 retained_intron Homo_sapiens 0.0000004 62
ENST00000536445 POLE-014 retained_intron Homo_sapiens 0.000000002 69
ENST00000543026 DDX11-014 retained_intron Homo_sapiens 0.00000006 64
ENST00000550065 SUOX-008 nonsense_mediated_decay Homo_sapiens 0.000001 60
ENST00000559151 CASC4-010 processed_transcript Homo_sapiens 0.000004 57
ENST00000564039 C16orf13-010 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000565163 C16orf13-006 protein_coding Homo_sapiens 0 296
ENST00000565799 C16orf13-007 retained_intron Homo_sapiens 6e-39 165
ENST00000566157 OGFOD1-001 protein_coding Homo_sapiens 0.00000000002 77
ENST00000568077 C16orf13-013 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000568773 C16orf13-009 protein_coding Homo_sapiens 0 361
ENST00000568830 C16orf13-005 protein_coding Homo_sapiens 0 318
ENST00000573605 FBXW10-006 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000576164 MYH11-009 retained_intron Homo_sapiens 0.00000001 68
ENST00000587604 DNMT1-023 retained_intron Homo_sapiens 0.0000000003 69
ENST00000603918 BNIP3P28-001 processed_pseudogene Homo_sapiens 0.000002 58
ENST00000614890 C16orf13-201 protein_coding Homo_sapiens 0 316
ENST00000619416 KIAA0586-001 protein_coding Homo_sapiens 0.0000009 62

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