C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: unc-50 homolog (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026111 Unc50 10090 + 1:37430170-37439124 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027285 Unc50-001 37430170-37439124 protein_coding
  ENSMUST00000114925 Unc50-002 37430186-37438984 protein_coding
  ENSMUST00000118059 Unc50-005 37430202-37438987 protein_coding
  ENSMUST00000134184 Unc50-004 37431344-37437612 retained_intron
  ENSMUST00000144617 Unc50-003 37430177-37437478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027285ENSMUST00000114925ENSMUST00000118059ENSMUST00000134184ENSMUST00000144617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027285 16.102±7.81 69.357±20.00 13.768±3.65 6.554±0.00 19.570±12.35 29.392±18.54 3.881±2.14 16.237±6.85 13.854±2.85 18.216±13.26 2.010±0.34 30.108±20.65 12.553±3.92 21.583±1.86
ENSMUST00000114925 8.966±3.01 N/A 23.777±5.80 14.526±8.10 10.155±5.01 N/A 8.700±5.29 8.152±0.98 19.999±7.14 7.799±0.00 6.578±0.85 16.205±9.27 29.808±14.13 10.209±5.30
ENSMUST00000118059 5.619±1.02 14.222±0.00 N/A N/A 4.843±0.51 8.386±0.00 4.068±1.41 15.187±4.94 6.627±3.00 10.345±2.18 1.447±0.00 4.808±0.04 9.011±0.00 N/A
ENSMUST00000134184 N/A N/A N/A 6.594±0.00 N/A N/A N/A N/A N/A N/A N/A 14.155±0.00 17.501±3.09 5.835±0.00
ENSMUST00000144617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.325±2.71 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034F CIL_00034F_0002 CGP 1:37417084-37439124
CIL_00034E CIL_00034E_0002 CGP 1:37430170-37541016

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003723 IEA RNA binding
GO:0005637 IEA nuclear inner membrane
GO:0005794 IDA Golgi apparatus
GO:0007166 IEA cell surface receptor signaling pathway
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040455 unc50 unc-50 homolog (C. elegans) protein_coding Danio_rerio
ENSG00000115446 UNC50 unc-50 homolog (C. elegans) protein_coding Homo_sapiens

Loading