C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-50 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027285 Unc50-001 ENSMUSG00000026111 10090 + 1:37430170-37439124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027285 16.102±7.81 69.357±20.00 13.768±3.65 6.554±0.00 19.570±12.35 29.392±18.54 3.881±2.14 16.237±6.85 13.854±2.85 18.216±13.26 2.010±0.34 30.108±20.65 12.553±3.92 21.583±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034F CIL_00034F_0002 CGP 1:37417084-37439124
CIL_00034E CIL_00034E_0002 CGP 1:37430170-37541016

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003723 IEA RNA binding
GO:0005637 IEA nuclear inner membrane
GO:0005794 IDA Golgi apparatus
GO:0007166 IEA cell surface receptor signaling pathway
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357765 UNC50-001 protein_coding Homo_sapiens 0 881
ENST00000393493 UNC50-004 protein_coding Homo_sapiens 0 350
ENST00000409347 UNC50-003 protein_coding Homo_sapiens 0 880
ENST00000409975 UNC50-002 protein_coding Homo_sapiens 0 880
ENST00000423713 UNC50-005 protein_coding Homo_sapiens 1e-18 97
ENST00000466492 UNC50-006 retained_intron Homo_sapiens 0 291

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