C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2310035C23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026319 2310035C23Rik 10090 + 1:105663861-105755191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039173 2310035C23Rik-002 105663883-105754075 protein_coding
  ENSMUST00000086721 2310035C23Rik-004 105663913-105755191 protein_coding
  ENSMUST00000185692 2310035C23Rik-007 105696590-105755186 nonsense_mediated_decay
  ENSMUST00000185750 2310035C23Rik-011 105730814-105734580 retained_intron
  ENSMUST00000186807 2310035C23Rik-003 105663861-105754072 nonsense_mediated_decay
  ENSMUST00000188588 2310035C23Rik-013 105740980-105750989 retained_intron
  ENSMUST00000188969 2310035C23Rik-010 105703759-105716956 retained_intron
  ENSMUST00000189091 2310035C23Rik-009 105663861-105687141 processed_transcript
  ENSMUST00000190459 2310035C23Rik-012 105740212-105753525 retained_intron
  ENSMUST00000190501 2310035C23Rik-001 105663923-105753711 protein_coding
  ENSMUST00000191150 2310035C23Rik-008 105663937-105665150 processed_transcript
  ENSMUST00000191293 2310035C23Rik-006 105664441-105738497 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039173ENSMUST00000086721ENSMUST00000185692ENSMUST00000186807ENSMUST00000190459ENSMUST00000190501ENSMUST00000191150ENSMUST00000191293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039173 N/A N/A N/A 3.127±0.00 N/A N/A N/A N/A 3.484±0.00 N/A N/A 1.506±0.00 0.776±0.00 1.117±0.32
ENSMUST00000086721 1.277±0.20 N/A 5.428±0.39 3.229±1.02 1.578±0.80 5.062±0.68 N/A 0.647±0.05 1.594±0.60 1.884±0.00 0.191±0.00 1.334±0.00 3.031±0.02 0.658±0.00
ENSMUST00000185692 3.673±0.12 N/A 6.925±0.24 6.496±1.42 2.144±0.64 N/A 1.198±0.00 N/A 2.249±0.31 4.234±1.24 0.299±0.05 4.148±0.59 2.685±0.05 1.833±0.40
ENSMUST00000186807 N/A N/A N/A N/A N/A N/A N/A N/A 1.024±0.17 N/A N/A 2.046±0.04 1.257±0.15 1.290±0.07
ENSMUST00000190459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.051±0.00 N/A
ENSMUST00000190501 N/A N/A N/A 8.238±0.00 N/A N/A N/A N/A N/A N/A 0.553±0.00 2.576±0.00 1.837±0.48 N/A
ENSMUST00000191150 4.527±0.00 7.719±2.84 N/A N/A 3.885±0.21 6.999±0.00 N/A 3.816±0.43 3.251±0.00 N/A N/A 4.219±1.12 N/A N/A
ENSMUST00000191293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.19 0.469±0.00 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055U CIL_00055U_0002 CGP 1:105518422-105755191
CIL_00071U CIL_00071U_0002 CGP 1:105663861-105847981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038043 zgc:66014 zgc:66014 protein_coding Danio_rerio
ENSG00000134444 KIAA1468 KIAA1468 protein_coding Homo_sapiens

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