C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134444-ENSG00000141655 CGP 9606 18:62187258-62391292
GeneTranscriptPositionBiotype
ENSG00000134444 (KIAA1468)
KIAA1468 		ENST00000256858 (KIAA1468-002) 62187258-62307112 protein_coding
ENST00000398130 (KIAA1468-001) 62187274-62307829 protein_coding
ENST00000586920 (KIAA1468-006) 62268515-62274042 retained_intron
ENST00000587198 (KIAA1468-011) 62280326-62298848 retained_intron
ENST00000587714 (KIAA1468-012) 62282316-62285548 processed_transcript
ENST00000587725 (KIAA1468-009) 62187291-62275571 non_stop_decay
ENST00000587764 (KIAA1468-010) 62277596-62291616 processed_transcript
ENST00000588446 (KIAA1468-007) 62261611-62275572 non_stop_decay
ENST00000590713 (KIAA1468-003) 62220860-62227450 retained_intron
ENST00000591227 (KIAA1468-005) 62228440-62254711 processed_transcript
ENST00000592479 (KIAA1468-004) 62228385-62235407 processed_transcript
ENST00000593217 (KIAA1468-013) 62282320-62285973 processed_transcript
ENSG00000141655 (TNFRSF11A)
tumor necrosis factor receptor superfamily, member 11a, NFKB activator 		ENST00000269485 (TNFRSF11A-002) 62325287-62387659 protein_coding
ENST00000586569 (TNFRSF11A-001) 62325315-62391292 protein_coding
ENST00000587697 (TNFRSF11A-004) 62357903-62360043 retained_intron
ENST00000592013 (TNFRSF11A-003) 62325326-62336786 retained_intron
ENST00000616710 (TNFRSF11A-201) 62325287-62387710 protein_coding
ENST00000617039 (TNFRSF11A-202) 62325287-62387710 protein_coding
ENSG00000199867 (Y_RNA)
Y RNA 		ENST00000362997 (Y_RNA.1-281) 62330812-62330913 misc_RNA
ENSG00000266900 (RP11-173A16.2)
 ENST00000588561 (RP11-173A16.2-001) 62245810-62247412 sense_intronic
ENSG00000267341 (RP11-640A1.3)
 ENST00000589084 (RP11-640A1.3-001) 62372894-62378130 antisense
ENSG00000267560 (RP11-173A16.1)
 ENST00000591014 (RP11-173A16.1-001) 62300036-62300998 antisense
CIL_00071U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026319-ENSMUSG00000026321 CGP 10090 1:105663861-105847981
GeneTranscriptPositionBiotype
ENSMUSG00000026319 (2310035C23Rik)
RIKEN cDNA 2310035C23 gene 		ENSMUST00000039173 (2310035C23Rik-002) 105663883-105754075 protein_coding
ENSMUST00000086721 (2310035C23Rik-004) 105663913-105755191 protein_coding
ENSMUST00000185692 (2310035C23Rik-007) 105696590-105755186 nonsense_mediated_decay
ENSMUST00000185750 (2310035C23Rik-011) 105730814-105734580 retained_intron
ENSMUST00000186807 (2310035C23Rik-003) 105663861-105754072 nonsense_mediated_decay
ENSMUST00000188588 (2310035C23Rik-013) 105740980-105750989 retained_intron
ENSMUST00000188969 (2310035C23Rik-010) 105703759-105716956 retained_intron
ENSMUST00000189091 (2310035C23Rik-009) 105663861-105687141 processed_transcript
ENSMUST00000190459 (2310035C23Rik-012) 105740212-105753525 retained_intron
ENSMUST00000190501 (2310035C23Rik-001) 105663923-105753711 protein_coding
ENSMUST00000191150 (2310035C23Rik-008) 105663937-105665150 processed_transcript
ENSMUST00000191293 (2310035C23Rik-006) 105664441-105738497 retained_intron
ENSMUSG00000026321 (Tnfrsf11a)
tumor necrosis factor receptor superfamily, member 11a, NFKB activator 		ENSMUST00000027559 (Tnfrsf11a-001) 105780718-105847981 protein_coding
ENSMUST00000187658 (Tnfrsf11a-003) 105819870-105825401 retained_intron
ENSMUST00000187812 (Tnfrsf11a-002) 105780750-105814403 retained_intron
ENSMUSG00000101330 (RP24-353D23.2)
predicted gene 10193 		ENSMUST00000188288 (RP24-353D23.2-001) 105764444-105764674 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071U_0001ENSG00000134444ENST00000256858ENST00000398130ENST00000586920ENST00000587198ENST00000587714ENST00000587725ENST00000587764ENST00000588446ENST00000590713ENST00000591227ENST00000592479ENST00000593217ENSG00000141655ENST00000269485ENST00000586569ENST00000587697ENST00000592013ENST00000616710ENST00000617039ENSG00000199867ENST00000362997ENSG00000266900ENST00000588561ENSG00000267341ENST00000589084ENSG00000267560ENST00000591014CIL_00071U_0002ENSMUSG00000026319ENSMUST00000039173ENSMUST00000086721ENSMUST00000185692ENSMUST00000185750ENSMUST00000186807ENSMUST00000188588ENSMUST00000188969ENSMUST00000189091ENSMUST00000190459ENSMUST00000190501ENSMUST00000191150ENSMUST00000191293ENSMUSG00000026321ENSMUST00000027559ENSMUST00000187658ENSMUST00000187812ENSMUSG00000101330ENSMUST00000188288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071U_0001ENSG00000134444ENST00000256858ENST00000398130ENST00000587198ENST00000587725ENSG00000141655ENST00000269485ENST00000586569ENST00000587697ENST00000592013ENST00000616710ENST00000617039ENSG00000199867ENST00000362997ENSG00000266900ENST00000588561ENSG00000267341ENST00000589084ENSG00000267560ENST00000591014CIL_00071U_0002ENSMUSG00000026319ENSMUST00000039173ENSMUST00000086721ENSMUST00000185692ENSMUST00000186807ENSMUST00000190459ENSMUST00000190501ENSMUST00000191150ENSMUST00000191293ENSMUSG00000026321ENSMUST00000027559ENSMUST00000187812ENSMUSG00000101330ENSMUST00000188288
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134444 ENST00000256858 1.629±0.00 3.299±0.00 1.136±0.00 4.506±0.26 1.872±0.44 1.782±0.18 1.101±0.67 2.142±1.27 1.979±0.37 1.735±0.68 1.536±0.00 2.274±1.49 2.275±0.85 3.518±0.08
ENST00000398130 N/A N/A 0.345±0.00 N/A N/A 0.753±0.00 N/A 0.654±0.00 N/A N/A N/A 0.692±0.41 0.375±0.00 N/A
ENST00000586920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.487±0.00 N/A N/A N/A
ENST00000587714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587725 N/A N/A N/A N/A 1.968±0.00 N/A N/A N/A 2.144±0.00 4.312±0.00 N/A N/A N/A N/A
ENST00000587764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141655 ENST00000269485 N/A 0.999±0.00 N/A N/A 1.009±0.20 1.297±0.00 N/A 0.536±0.00 0.348±0.29 N/A N/A 0.868±0.76 0.979±0.13 0.439±0.00
ENST00000586569 0.091±0.00 1.094±0.00 N/A N/A 0.355±0.00 0.712±0.51 0.085±0.00 0.180±0.00 0.070±0.05 0.094±0.05 0.028±0.00 0.194±0.13 0.624±0.20 0.254±0.07
ENST00000587697 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A
ENST00000592013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A
ENST00000616710 0.249±0.00 1.019±0.00 N/A 0.344±0.08 N/A 4.051±0.00 0.271±0.00 N/A N/A 0.183±0.00 N/A 1.141±0.00 1.100±0.38 0.691±0.00
ENST00000617039 N/A N/A N/A N/A 0.391±0.00 0.397±0.00 N/A 0.142±0.00 0.046±0.00 0.088±0.00 N/A 0.111±0.00 N/A N/A
ENSG00000199867 ENST00000362997 N/A 0.369±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266900 ENST00000588561 0.029±0.00 0.082±0.00 0.360±0.00 0.387±0.37 0.668±0.66 2.303±0.00 0.316±0.31 0.365±0.00 1.041±0.00 1.281±0.00 0.186±0.00 0.429±0.71 N/A 0.047±0.01
ENSG00000267341 ENST00000589084 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00
ENSG00000267560 ENST00000591014 0.089±0.00 0.145±0.00 N/A 0.377±0.00 0.123±0.00 0.066±0.00 N/A 0.080±0.01 N/A 0.253±0.00 N/A 0.234±0.21 N/A 0.236±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026319 ENSMUST00000039173 N/A N/A N/A 3.127±0.00 N/A N/A N/A N/A 3.484±0.00 N/A N/A 1.506±0.00 0.776±0.00 1.117±0.32
ENSMUST00000086721 1.277±0.20 N/A 5.428±0.39 3.229±1.02 1.578±0.80 5.062±0.68 N/A 0.647±0.05 1.594±0.60 1.884±0.00 0.191±0.00 1.334±0.00 3.031±0.02 0.658±0.00
ENSMUST00000185692 3.673±0.12 N/A 6.925±0.24 6.496±1.42 2.144±0.64 N/A 1.198±0.00 N/A 2.249±0.31 4.234±1.24 0.299±0.05 4.148±0.59 2.685±0.05 1.833±0.40
ENSMUST00000185750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186807 N/A N/A N/A N/A N/A N/A N/A N/A 1.024±0.17 N/A N/A 2.046±0.04 1.257±0.15 1.290±0.07
ENSMUST00000188588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.051±0.00 N/A
ENSMUST00000190501 N/A N/A N/A 8.238±0.00 N/A N/A N/A N/A N/A N/A 0.553±0.00 2.576±0.00 1.837±0.48 N/A
ENSMUST00000191150 4.527±0.00 7.719±2.84 N/A N/A 3.885±0.21 6.999±0.00 N/A 3.816±0.43 3.251±0.00 N/A N/A 4.219±1.12 N/A N/A
ENSMUST00000191293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.19 0.469±0.00 0.130±0.00
ENSMUSG00000026321 ENSMUST00000027559 1.748±0.48 1.546±0.56 5.335±1.83 0.288±0.10 2.653±0.99 27.818±7.64 0.481±0.08 1.175±0.21 0.264±0.11 2.029±0.17 0.094±0.05 1.946±0.91 0.285±0.25 0.125±0.05
ENSMUST00000187658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187812 1.671±0.00 1.623±0.15 N/A N/A 3.250±0.00 30.512±8.36 0.508±0.00 0.738±0.00 0.151±0.00 N/A N/A 1.156±0.00 0.230±0.00 0.083±0.00
ENSMUSG00000101330 ENSMUST00000188288 2.159±1.04 6.638±0.00 8.050±0.06 3.482±2.25 N/A N/A 1.099±0.27 1.569±0.66 2.318±1.73 N/A N/A 4.132±0.09 0.450±0.08 3.152±1.61

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