C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 6d1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026336 Slco6d1 10090 + 1:98421124-98516991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027575 Slco6d1-001 98421124-98509380 protein_coding
  ENSMUST00000160796 Slco6d1-003 98421154-98509247 protein_coding
  ENSMUST00000162468 Slco6d1-002 98421127-98516991 nonsense_mediated_decay
  ENSMUST00000162782 Slco6d1-004 98499889-98509383 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000027575ENSMUST00000160796ENSMUST00000162468ENSMUST00000162782
Transcript ID Brain Testis
ENSMUST00000027575 N/A 4.787±2.00
ENSMUST00000160796 0.006±0.00 6.099±3.65
ENSMUST00000162468 N/A 1.672±0.09
ENSMUST00000162782 0.265±0.00 83.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WC CIL_0007WC_0002 VISTA 1:97887842-98493251

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205359 SLCO6A1 solute carrier organic anion transporter family, member 6A1 protein_coding Homo_sapiens

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