C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELK4, member of ETS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026436 Elk4 10090 + 1:132007607-132032612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027696 Elk4-003 132007876-132023661 protein_coding
  ENSMUST00000086556 Elk4-001 132007607-132026448 protein_coding
  ENSMUST00000124579 Elk4-006 132008109-132014456 processed_transcript
  ENSMUST00000131159 Elk4-005 132018443-132031694 processed_transcript
  ENSMUST00000146188 Elk4-007 132008099-132014598 processed_transcript
  ENSMUST00000146432 Elk4-004 132008297-132018305 protein_coding
  ENSMUST00000147218 Elk4-002 132017808-132032612 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000086556ENSMUST00000147218
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086556 5.790±1.16 13.267±1.63 10.534±0.00 1.864±0.46 9.325±3.41 3.940±0.35 3.583±1.74 10.202±1.36 3.718±0.47 6.715±0.00 2.949±0.71 0.848±0.36
ENSMUST00000147218 7.787±0.61 N/A N/A 3.393±0.13 9.801±1.79 6.289±0.30 5.453±1.47 12.792±1.40 6.047±0.00 N/A 5.402±0.84 1.338±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0070932 ISS histone H3 deacetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077092 elk4 ELK4, ETS-domain protein protein_coding Danio_rerio
ENSG00000158711 ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) protein_coding Homo_sapiens

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