C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ral guanine nucleotide dissociation stimulator,-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026482 Rgl1 10090 - 1:152516760-152766351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027760 Rgl1-001 152516951-152625217 protein_coding
  ENSMUST00000111857 Rgl1-003 152518750-152766351 protein_coding
  ENSMUST00000111859 Rgl1-002 152516760-152766305 protein_coding
  ENSMUST00000128251 Rgl1-006 152557543-152592759 processed_transcript
  ENSMUST00000149536 Rgl1-005 152557543-152625029 nonsense_mediated_decay
  ENSMUST00000188395 Rgl1-004 152551508-152553044 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027760ENSMUST00000111857ENSMUST00000111859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027760 18.149±6.79 3.054±0.89 9.677±4.85 2.855±2.35 14.099±2.32 3.131±0.58 6.290±1.12 33.635±2.84 3.522±1.83 19.399±0.53 1.212±0.36 6.278±3.40 13.237±3.98 5.758±1.98
ENSMUST00000111857 2.188±0.00 0.596±0.00 N/A 10.242±12.45 N/A N/A 1.419±0.00 5.613±0.00 0.936±0.00 N/A 0.411±0.00 3.060±3.01 8.861±5.84 15.417±1.82
ENSMUST00000111859 N/A 0.367±0.00 N/A 1.826±1.68 N/A N/A N/A N/A N/A N/A N/A 1.310±0.17 N/A 2.016±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IE CIL_0005IE_0002 CGP 1:152516760-152766351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005989 rgl1 ral guanine nucleotide dissociation stimulator-like 1 protein_coding Danio_rerio
ENSG00000143344 RGL1 ral guanine nucleotide dissociation stimulator-like 1 protein_coding Homo_sapiens

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