C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: astrotactin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026587 Astn1 10090 + 1:158362304-158691786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046110 Astn1-201 158362304-158691786 protein_coding
  ENSMUST00000170718 Astn1-202 158362340-158611018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046110ENSMUST00000170718
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046110 0.079±0.05 1.350±0.32 0.250±0.18 22.070±7.53 0.240±0.04 0.455±0.11 0.190±0.03 0.172±0.06 0.021±0.01 0.017±0.01 0.024±0.01 0.572±0.18 0.213±0.28 0.088±0.05
ENSMUST00000170718 0.153±0.04 0.649±0.13 N/A N/A 0.132±0.00 N/A 0.152±0.04 N/A 0.019±0.00 0.003±0.00 0.048±0.00 0.369±0.26 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031V CIL_00031V_0002 CGP 1:158245271-158691786
CIL_0005CO CIL_0005CO_0002 CGP 1:158362304-158980490

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0005515 IPI protein binding
GO:0005768 IDA endosome
GO:0007158 IDA neuron cell-cell adhesion
GO:0007626 IMP locomotory behavior
GO:0009897 IDA external side of plasma membrane
GO:0016021 IDA integral component of membrane
GO:0016337 IMP single organismal cell-cell adhesion
GO:0016477 IMP cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068323 astn1 astrotactin 1 protein_coding Danio_rerio
ENSG00000152092 ASTN1 astrotactin 1 protein_coding Homo_sapiens

Loading