C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TatD DNase domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026632 Tatdn3 10090 - 1:191045826-191062932 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027945 Tatdn3-004 191045842-191062905 protein_coding
  ENSMUST00000085633 Tatdn3-003 191045838-191062904 protein_coding
  ENSMUST00000110891 Tatdn3-002 191045842-191062904 protein_coding
  ENSMUST00000110893 Tatdn3-001 191045826-191062932 protein_coding
  ENSMUST00000124497 Tatdn3-007 191057899-191059441 retained_intron
  ENSMUST00000143876 Tatdn3-005 191058781-191062904 processed_transcript
  ENSMUST00000153757 Tatdn3-008 191054957-191058846 retained_intron
  ENSMUST00000156341 Tatdn3-009 191045845-191049833 retained_intron
  ENSMUST00000156527 Tatdn3-006 191060063-191062904 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027945ENSMUST00000085633ENSMUST00000110893ENSMUST00000143876ENSMUST00000153757ENSMUST00000156341ENSMUST00000156527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027945 3.306±1.04 1.491±0.65 6.774±1.38 2.205±0.00 2.322±0.64 1.548±0.47 2.141±0.09 2.756±0.45 2.164±0.61 1.058±0.53 3.059±0.85 1.942±0.77 1.641±0.71 3.746±1.36
ENSMUST00000085633 N/A N/A N/A N/A N/A N/A N/A 0.788±0.00 N/A N/A N/A N/A 1.730±0.66 1.077±0.00
ENSMUST00000110893 1.787±0.41 1.240±0.53 N/A N/A 0.648±0.20 0.387±0.02 N/A 1.853±0.43 1.344±0.30 1.117±0.05 1.452±0.20 1.080±0.54 1.190±0.02 2.243±0.28
ENSMUST00000143876 N/A N/A N/A N/A 1.508±0.00 N/A N/A N/A N/A N/A N/A N/A 4.187±0.00 N/A
ENSMUST00000153757 N/A N/A N/A 1.988±0.00 N/A 1.286±0.00 N/A N/A N/A N/A N/A 3.342±1.26 N/A 0.882±0.00
ENSMUST00000156341 1.123±0.16 0.522±0.25 N/A 2.026±0.00 1.321±0.17 0.728±0.15 2.477±0.00 0.880±0.01 N/A 1.186±0.28 3.200±0.67 5.076±0.00 0.789±0.44 1.630±0.00
ENSMUST00000156527 N/A 1.184±0.00 N/A 31.568±0.00 N/A N/A N/A N/A 4.106±0.00 N/A N/A N/A 17.794±6.17 36.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JQ CIL_0008JQ_0002 VISTA 1:190939014-191541717

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0004536 IBA deoxyribonuclease activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006308 IBA DNA catabolic process
GO:0016888 IEA endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044072 TATDN3 TatD DNase domain containing 3 protein_coding Danio_rerio
ENSG00000203705 TATDN3 TatD DNase domain containing 3 protein_coding Homo_sapiens

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