C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: upper zone of growth plate and cartilage matrix associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026668 Ucma 10090 + 2:4976122-4985748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027978 Ucma-001 4976181-4985745 protein_coding
  ENSMUST00000115010 Ucma-003 4976151-4985740 protein_coding
  ENSMUST00000127282 Ucma-002 4976125-4981320 processed_transcript
  ENSMUST00000167607 Ucma-201 4976122-4985748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000027978ENSMUST00000115010ENSMUST00000127282ENSMUST00000167607
Transcript ID Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027978 0.250±0.22 0.103±0.00 N/A 0.017±0.00 0.099±0.05 N/A 0.135±0.05 0.054±0.01 N/A
ENSMUST00000115010 0.093±0.03 N/A 0.519±0.05 N/A N/A N/A N/A N/A N/A
ENSMUST00000127282 N/A N/A 0.396±0.22 N/A N/A N/A 0.258±0.16 N/A 0.136±0.08
ENSMUST00000167607 0.058±0.01 N/A 0.125±0.03 0.009±0.00 N/A 0.156±0.00 N/A N/A 0.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763
CIL_00015C CIL_00015C_0002 CGP 2:4919019-4985748
CIL_0002GA CIL_0002GA_0002 CGP 2:4976122-5012791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0016235 IDA aggresome
GO:0031012 IDA extracellular matrix
GO:0045668 IDA negative regulation of osteoblast differentiation
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005485 ucmab upper zone of growth plate and cartilage matrix associated b protein_coding Danio_rerio
ENSDARG00000027799 ucmaa upper zone of growth plate and cartilage matrix associated a protein_coding Danio_rerio
ENSG00000165623 UCMA upper zone of growth plate and cartilage matrix associated protein_coding Homo_sapiens

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