C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: minichromosome maintenance deficient 10 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026669 Mcm10 10090 - 2:4989714-5012791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027980 Mcm10-006 4990724-5012791 protein_coding
  ENSMUST00000102985 Mcm10-001 4989714-5012344 protein_coding
  ENSMUST00000125201 Mcm10-004 4999021-5005099 retained_intron
  ENSMUST00000125349 Mcm10-005 4990724-4995894 retained_intron
  ENSMUST00000125851 Mcm10-002 5006998-5012715 retained_intron
  ENSMUST00000129443 Mcm10-007 5006511-5012753 processed_transcript
  ENSMUST00000139882 Mcm10-009 4991031-4993257 retained_intron
  ENSMUST00000146257 Mcm10-008 5004042-5005319 retained_intron
  ENSMUST00000150091 Mcm10-003 4990724-5001558 retained_intron
  ENSMUST00000151533 Mcm10-010 4991260-4994838 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027980ENSMUST00000102985ENSMUST00000125201ENSMUST00000125349ENSMUST00000125851ENSMUST00000129443ENSMUST00000139882ENSMUST00000146257ENSMUST00000150091ENSMUST00000151533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027980 0.365±0.31 0.116±0.06 0.221±0.01 1.167±0.89 0.167±0.09 1.113±0.44 0.014±0.00 0.216±0.09 9.635±4.84 0.213±0.04 0.070±0.00 1.498±0.82 7.945±6.33 0.649±0.26
ENSMUST00000102985 0.034±0.00 0.094±0.00 0.057±0.00 0.242±0.12 0.082±0.00 N/A N/A N/A 1.425±0.60 0.033±0.00 0.017±0.00 0.362±0.00 N/A 0.181±0.01
ENSMUST00000125201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A
ENSMUST00000125349 0.486±0.30 0.071±0.00 0.212±0.00 0.455±0.19 0.765±0.63 1.606±0.64 0.028±0.02 0.692±0.17 8.981±3.01 0.323±0.10 N/A 1.558±0.50 3.240±2.74 0.940±0.12
ENSMUST00000125851 N/A N/A N/A N/A 0.382±0.00 N/A 0.080±0.00 N/A N/A N/A 0.065±0.00 N/A N/A N/A
ENSMUST00000129443 N/A N/A N/A N/A N/A N/A 0.134±0.01 N/A N/A N/A N/A N/A N/A 1.886±0.00
ENSMUST00000139882 N/A 0.104±0.04 0.298±0.00 N/A N/A N/A 0.044±0.01 N/A N/A 0.110±0.00 0.132±0.00 N/A N/A N/A
ENSMUST00000146257 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A 0.142±0.00 N/A N/A N/A
ENSMUST00000150091 0.440±0.25 0.216±0.07 0.165±0.00 N/A 0.223±0.10 0.564±0.08 N/A 0.193±0.09 1.147±0.00 0.078±0.04 0.027±0.00 1.220±0.51 N/A 0.771±0.03
ENSMUST00000151533 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.035±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763
CIL_0002GA CIL_0002GA_0002 CGP 2:4976122-5012791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0008283 IMP cell proliferation
GO:0042802 IEA identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045815 mcm10 minichromosome maintenance complex component 10 protein_coding Danio_rerio
ENSG00000065328 MCM10 minichromosome maintenance complex component 10 protein_coding Homo_sapiens

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