C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 10 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027980 Mcm10-006 ENSMUSG00000026669 10090 - 2:4990724-5012791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027980 0.365±0.31 0.116±0.06 0.221±0.01 1.167±0.89 0.167±0.09 1.113±0.44 0.014±0.00 0.216±0.09 9.635±4.84 0.213±0.04 0.070±0.00 1.498±0.82 7.945±6.33 0.649±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763
CIL_0002GA CIL_0002GA_0002 CGP 2:4976122-5012791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0006260 IEA DNA replication
GO:0008283 IMP cell proliferation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378694 MCM10-002 protein_coding Homo_sapiens 0 1552
ENST00000378714 MCM10-001 protein_coding Homo_sapiens 0 1650
ENST00000484800 MCM10-003 protein_coding Homo_sapiens 0 1650
ENST00000485659 MCM10-007 retained_intron Homo_sapiens 0 322

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