C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kelch-like 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026705 Klhl20 10090 - 1:161088375-161131511 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111611 Klhl20-001 161088375-161131511 protein_coding
  ENSMUST00000117467 Klhl20-005 161088380-161131428 nonsense_mediated_decay
  ENSMUST00000140905 Klhl20-002 161088375-161131511 retained_intron
  ENSMUST00000145736 Klhl20-004 161106948-161131511 retained_intron
  ENSMUST00000148952 Klhl20-003 161096445-161131511 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111611ENSMUST00000117467ENSMUST00000140905ENSMUST00000148952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111611 4.737±1.24 3.047±1.20 5.928±0.60 4.463±1.43 4.356±2.04 2.687±0.62 2.726±0.16 3.124±0.70 2.356±1.09 4.941±0.78 2.652±0.35 3.945±1.13 4.190±0.46 2.083±0.47
ENSMUST00000117467 N/A N/A N/A N/A N/A 0.734±0.00 N/A N/A N/A N/A 0.799±0.07 1.789±0.11 1.773±0.02 0.602±0.00
ENSMUST00000140905 0.583±0.02 0.528±0.00 N/A 0.295±0.00 0.755±0.00 0.822±0.00 0.376±0.00 N/A 0.321±0.14 1.252±0.00 N/A 0.888±0.21 0.561±0.00 N/A
ENSMUST00000148952 1.246±0.00 N/A 1.099±0.00 1.590±0.00 1.397±0.20 0.672±0.04 0.590±0.00 0.856±0.00 0.635±0.14 1.046±0.00 0.499±0.11 1.280±0.09 0.681±0.04 0.757±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005737 ISS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006895 ISS Golgi to endosome transport
GO:0015031 IEA protein transport
GO:0016567 ISS protein ubiquitination
GO:0016605 ISS PML body
GO:0019964 ISS interferon-gamma binding
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0042995 IEA cell projection
GO:0043066 ISS negative regulation of apoptotic process
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990390 ISS protein K33-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038801 klhl20 kelch-like 20 (Drosophila) protein_coding Danio_rerio
ENSG00000076321 KLHL20 kelch-like family member 20 protein_coding Homo_sapiens

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