C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117467 Klhl20-005 ENSMUSG00000026705 10090 - 1:161088380-161131428 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryPlacentaTestisENSMUST00000117467
Transcript ID Colon Muscle Ovary Placenta Testis
ENSMUST00000117467 0.734±0.00 0.799±0.07 1.789±0.11 1.773±0.02 0.602±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005737 ISS cytoplasm
GO:0005802 ISS trans-Golgi network
GO:0006895 ISS Golgi to endosome transport
GO:0015031 IEA protein transport
GO:0016567 ISS protein ubiquitination
GO:0016605 ISS PML body
GO:0019964 ISS interferon-gamma binding
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0042995 IEA cell projection
GO:0043066 ISS negative regulation of apoptotic process
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990390 ISS protein K33-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000209884 KLHL20-001 protein_coding Homo_sapiens 0 2833
ENST00000479505 KLHL20-003 processed_transcript Homo_sapiens 0 279
ENST00000483154 KLHL20-004 processed_transcript Homo_sapiens 0 830
ENST00000488983 KLHL20-005 processed_transcript Homo_sapiens 0 409
ENST00000493170 KLHL20-002 processed_transcript Homo_sapiens 0 944

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