C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026889 Rbm18 10090 - 2:36116079-36136773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028251 Rbm18-001 36116079-36136773 protein_coding
  ENSMUST00000122456 Rbm18-004 36117626-36136611 protein_coding
  ENSMUST00000134668 Rbm18-003 36117768-36136615 nonsense_mediated_decay
  ENSMUST00000142809 Rbm18-002 36126220-36136611 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028251 8.567±2.61 3.597±0.06 14.316±1.37 20.864±6.32 6.555±3.22 3.873±0.36 7.598±2.69 7.177±0.60 5.269±2.43 7.524±2.19 10.315±0.45 8.849±1.86 13.954±0.90 4.264±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N8 CIL_0006N8_0002 CGP 2:36081953-36136773
CIL_0006N9 CIL_0006N9_0002 CGP 2:36116079-36190647

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044255 rbm18 RNA binding motif protein 18 protein_coding Danio_rerio
ENSG00000119446 RBM18 RNA binding motif protein 18 protein_coding Homo_sapiens

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