C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700020A23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027409 1700020A23Rik 10090 + 2:130405259-130406074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028898 1700020A23Rik-001 130405286-130406074 protein_coding
  ENSMUST00000110281 1700020A23Rik-002 130405259-130406070 protein_coding
  ENSMUST00000189961 1700020A23Rik-003 130405265-130406018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028898ENSMUST00000110281ENSMUST00000189961
Transcript ID Adipose Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028898 0.045±0.00 N/A 0.068±0.02 0.130±0.00 0.032±0.00 N/A 0.122±0.01 0.504±0.29 0.052±0.02 43.995±21.08
ENSMUST00000110281 0.070±0.00 0.092±0.00 0.062±0.00 0.067±0.01 N/A 0.087±0.00 0.173±0.00 0.499±0.22 0.177±0.03 70.117±28.83
ENSMUST00000189961 N/A 0.062±0.00 N/A 0.061±0.00 N/A N/A N/A 0.797±0.09 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_0000FQ CIL_0000FQ_0002 CGP 2:130390775-130408256
CIL_0000FP CIL_0000FP_0002 CGP 2:130405239-130408256
CIL_00006C CIL_00006C_0002 CGP 2:130405259-130407902

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000258713 C20orf141 chromosome 20 open reading frame 141 protein_coding Homo_sapiens

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