C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027412 Lpin3 10090 + 2:160880670-160906002 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040872 Lpin3-002 160888108-160906002 protein_coding
  ENSMUST00000109455 Lpin3-001 160888108-160906002 protein_coding
  ENSMUST00000109456 Lpin3-004 160880670-160905997 protein_coding
  ENSMUST00000109457 Lpin3-005 160888171-160905792 protein_coding
  ENSMUST00000124920 Lpin3-003 160901549-160903737 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040872ENSMUST00000109455ENSMUST00000109456ENSMUST00000109457ENSMUST00000124920
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040872 0.888±0.27 N/A 6.013±0.90 N/A 0.887±0.00 8.274±1.00 N/A 1.301±0.25 0.446±0.27 1.112±0.07 1.437±0.00 1.497±0.57 3.481±0.59 0.822±0.16
ENSMUST00000109455 N/A N/A N/A N/A 1.367±0.00 N/A N/A 1.305±0.71 0.620±0.29 1.732±0.13 N/A 1.862±0.93 N/A N/A
ENSMUST00000109456 2.971±0.47 9.411±1.71 2.602±0.69 N/A 0.960±0.00 N/A 0.979±0.21 0.945±0.37 0.235±0.11 1.561±0.56 0.756±0.39 3.496±1.69 1.973±0.44 1.063±0.09
ENSMUST00000109457 1.723±0.00 7.532±3.33 1.314±0.00 0.168±0.00 1.535±0.66 3.327±0.83 0.346±0.02 1.998±0.17 0.527±0.37 1.905±0.55 0.532±0.00 2.260±0.69 1.473±0.63 1.963±0.13
ENSMUST00000124920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.463±0.00 8.236±0.00 10.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E6 CIL_0004E6_0002 CGP 2:160748708-160906002
CIL_0004E9 CIL_0004E9_0002 CGP 2:160880670-160912328

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 ISA nucleus
GO:0006631 IEA fatty acid metabolic process
GO:0008195 IDA phosphatidate phosphatase activity
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015563 LPIN3 lipin 3 protein_coding Danio_rerio
ENSG00000132793 LPIN3 lipin 3 protein_coding Homo_sapiens

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