C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004E6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174306-ENSG00000132793 CGP 9606 20:41178448-41360582
GeneTranscriptPositionBiotype
ENSG00000124181 (PLCG1)
phospholipase C, gamma 1 		ENST00000244007 (PLCG1-013) 41136960-41175721 protein_coding
ENST00000373271 (PLCG1-005) 41137237-41175721 protein_coding
ENST00000423733 (PLCG1-020) 41180456-41196787 processed_transcript
ENST00000461641 (PLCG1-012) 41172411-41174312 retained_intron
ENST00000465571 (PLCG1-003) 41165807-41166880 retained_intron
ENST00000470528 (PLCG1-008) 41163174-41164005 retained_intron
ENST00000473632 (PLCG1-002) 41165280-41165860 retained_intron
ENST00000477870 (PLCG1-004) 41167657-41170618 retained_intron
ENST00000483175 (PLCG1-011) 41167916-41170910 retained_intron
ENST00000483646 (PLCG1-007) 41137732-41162647 processed_transcript
ENST00000490253 (PLCG1-006) 41137550-41159823 retained_intron
ENST00000492148 (PLCG1-001) 41162962-41163982 retained_intron
ENST00000599785 (PLCG1-014) 41170189-41182989 nonsense_mediated_decay
ENST00000607954 (PLCG1-016) 41173804-41182989 nonsense_mediated_decay
ENST00000608689 (PLCG1-015) 41172439-41182989 processed_transcript
ENST00000608885 (PLCG1-019) 41172516-41182989 nonsense_mediated_decay
ENST00000609257 (PLCG1-018) 41173731-41182960 nonsense_mediated_decay
ENST00000609821 (PLCG1-017) 41173507-41182960 processed_transcript
ENST00000612731 (PLCG1-021) 41168841-41176281 processed_transcript
ENST00000617873 (PLCG1-022) 41166728-41169628 processed_transcript
ENST00000619272 (PLCG1-023) 41168799-41170251 processed_transcript
ENSG00000132793 (LPIN3)
lipin 3 		ENST00000373257 (LPIN3-001) 41340920-41360582 protein_coding
ENST00000445975 (LPIN3-003) 41352681-41358470 protein_coding
ENST00000491528 (LPIN3-004) 41357976-41358893 processed_transcript
ENST00000496565 (LPIN3-002) 41357111-41358829 processed_transcript
ENSG00000174306 (ZHX3)
zinc fingers and homeoboxes 3 		ENST00000309060 (ZHX3-010) 41178448-41300078 protein_coding
ENST00000373261 (ZHX3-009) 41204628-41300078 protein_coding
ENST00000419740 (ZHX3-019) 41204778-41272253 protein_coding
ENST00000421422 (ZHX3-008) 41178448-41204041 protein_coding
ENST00000432768 (ZHX3-011) 41184916-41300126 protein_coding
ENST00000436099 (ZHX3-022) 41204774-41300074 protein_coding
ENST00000436440 (ZHX3-005) 41204648-41300078 protein_coding
ENST00000441102 (ZHX3-021) 41204562-41317597 protein_coding
ENST00000485686 (ZHX3-016) 41268981-41300117 processed_transcript
ENST00000487057 (ZHX3-003) 41213758-41300090 processed_transcript
ENST00000540170 (ZHX3-201) 41178451-41300081 protein_coding
ENST00000544979 (ZHX3-002) 41184368-41272258 protein_coding
ENST00000558993 (ZHX3-013) 41184821-41317186 protein_coding
ENST00000559028 (ZHX3-017) 41268990-41300127 processed_transcript
ENST00000559234 (ZHX3-007) 41182115-41317602 protein_coding
ENST00000559296 (ZHX3-015) 41268990-41317672 processed_transcript
ENST00000559436 (ZHX3-004) 41184820-41202396 protein_coding
ENST00000560361 (ZHX3-001) 41184827-41300094 protein_coding
ENST00000560364 (ZHX3-006) 41182114-41300087 protein_coding
ENST00000560456 (ZHX3-018) 41268990-41272273 processed_transcript
ENST00000560759 (ZHX3-014) 41268990-41272264 processed_transcript
ENST00000561291 (ZHX3-020) 41238727-41272245 processed_transcript
ENSG00000183798 (EMILIN3)
elastin microfibril interfacer 3 		ENST00000332312 (EMILIN3-001) 41359966-41366827 protein_coding
ENSG00000263989 (RN7SL615P)
RNA, 7SL, cytoplasmic 615, pseudogene 		ENST00000584065 (RN7SL615P-201) 41290280-41290577 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004E6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035877-ENSMUSG00000027412 CGP 10090 2:160748708-160906002
GeneTranscriptPositionBiotype
ENSMUSG00000016933 (Plcg1)
phospholipase C, gamma 1 		ENSMUST00000017077 (Plcg1-008) 160740987-160762506 processed_transcript
ENSMUST00000103115 (Plcg1-001) 160731310-160775760 protein_coding
ENSMUST00000109462 (Plcg1-003) 160731733-160763286 protein_coding
ENSMUST00000124652 (Plcg1-007) 160754572-160759447 processed_transcript
ENSMUST00000129568 (Plcg1-005) 160754547-160755169 retained_intron
ENSMUST00000143997 (Plcg1-002) 160760118-160762217 protein_coding
ENSMUST00000147254 (Plcg1-006) 160754906-160757147 retained_intron
ENSMUST00000151590 (Plcg1-004) 160731300-160762502 nonsense_mediated_decay
ENSMUST00000173061 (Plcg1-012) 160754067-160754864 retained_intron
ENSMUST00000173335 (Plcg1-010) 160752552-160758907 retained_intron
ENSMUST00000173791 (Plcg1-009) 160752487-160762155 retained_intron
ENSMUST00000174885 (Plcg1-011) 160731699-160747888 protein_coding
ENSMUSG00000027412 (Lpin3)
lipin 3 		ENSMUST00000040872 (Lpin3-002) 160888108-160906002 protein_coding
ENSMUST00000109455 (Lpin3-001) 160888108-160906002 protein_coding
ENSMUST00000109456 (Lpin3-004) 160880670-160905997 protein_coding
ENSMUST00000109457 (Lpin3-005) 160888171-160905792 protein_coding
ENSMUST00000124920 (Lpin3-003) 160901549-160903737 processed_transcript
ENSMUSG00000035877 (Zhx3)
zinc fingers and homeoboxes 3 		ENSMUST00000103111 (Zhx3-003) 160765185-160872572 protein_coding
ENSMUST00000103112 (Zhx3-001) 160765782-160859631 protein_coding
ENSMUST00000109460 (Zhx3-201) 160770447-160872990 protein_coding
ENSMUST00000127201 (Zhx3-005) 160781941-160872990 protein_coding
ENSMUST00000133937 (Zhx3-004) 160748708-160872998 processed_transcript
ENSMUST00000176141 (Zhx3-008) 160781904-160872829 protein_coding
ENSMUSG00000081854 (Gm11447)
predicted gene 11447 		ENSMUST00000118983 (Gm11447-001) 160845613-160846470 processed_pseudogene
ENSMUSG00000085303 (Gm16751)
predicted gene, 16751 		ENSMUST00000142212 (Gm16751-001) 160840836-160888028 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004E6_0001ENSG00000124181ENST00000244007ENST00000373271ENSG00000132793ENST00000373257ENST00000496565ENSG00000174306ENST00000309060ENST00000421422ENST00000432768ENST00000559234ENSG00000183798ENST00000332312ENSG00000263989ENST00000584065CIL_0004E6_0002ENSMUSG00000016933ENSMUST00000017077ENSMUST00000103115ENSMUST00000109462ENSMUST00000143997ENSMUST00000151590ENSMUST00000174885ENSMUSG00000027412ENSMUST00000040872ENSMUST00000109455ENSMUST00000109456ENSMUST00000109457ENSMUST00000124920ENSMUSG00000035877ENSMUST00000103111ENSMUST00000103112ENSMUST00000109460ENSMUSG00000081854ENSMUST00000118983ENSMUSG00000085303ENSMUST00000142212
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124181 ENST00000244007 12.376±0.00 20.541±0.00 N/A 9.490±4.33 8.233±1.86 8.260±4.83 5.412±3.16 9.886±0.00 2.644±0.00 11.772±4.11 4.888±3.48 18.427±9.11 17.431±3.43 27.520±5.19
ENST00000373271 N/A N/A N/A N/A N/A N/A N/A N/A 2.631±0.00 N/A N/A N/A N/A N/A
ENST00000423733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132793 ENST00000373257 1.154±0.00 N/A N/A 0.082±0.00 1.161±0.68 N/A 1.192±0.00 N/A 0.212±0.00 0.362±0.11 N/A 3.322±1.54 0.643±0.00 1.439±0.00
ENST00000445975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A
ENSG00000174306 ENST00000309060 N/A N/A N/A 2.869±1.15 N/A N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A
ENST00000373261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421422 3.964±0.00 3.928±0.00 3.331±0.00 4.306±0.00 2.264±0.00 2.604±1.28 2.015±1.02 3.743±0.80 2.255±0.33 N/A 3.373±0.00 4.011±0.00 N/A 6.687±0.00
ENST00000432768 N/A N/A 3.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559234 N/A N/A N/A N/A N/A N/A N/A N/A 2.106±0.00 N/A N/A N/A N/A N/A
ENST00000559296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183798 ENST00000332312 0.603±0.00 1.031±0.00 N/A 1.213±0.99 1.232±1.12 1.322±0.71 1.398±0.66 N/A 0.649±0.00 1.171±0.00 0.187±0.11 3.454±2.62 0.357±0.07 3.549±2.61
ENSG00000263989 ENST00000584065 N/A 0.187±0.00 N/A N/A 0.704±0.51 0.059±0.00 N/A 0.064±0.00 N/A N/A N/A 0.869±0.00 N/A 0.058±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016933 ENSMUST00000017077 13.445±0.11 9.305±0.97 N/A 9.117±0.00 10.543±3.95 N/A 5.200±0.51 N/A 3.105±1.98 11.167±2.34 N/A N/A N/A N/A
ENSMUST00000103115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.805±0.13 N/A N/A
ENSMUST00000109462 13.774±1.08 7.612±1.97 15.803±0.72 27.011±10.92 8.209±2.52 3.782±0.41 8.831±0.76 8.653±1.53 5.716±1.97 18.914±3.47 5.955±0.61 26.469±12.14 20.431±6.97 4.608±0.30
ENSMUST00000124652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.731±0.42 N/A
ENSMUST00000147254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151590 10.434±0.00 11.200±4.19 N/A 15.053±0.00 6.419±0.00 4.349±1.34 N/A 5.092±1.61 3.769±0.09 11.105±1.50 N/A 17.001±4.11 N/A N/A
ENSMUST00000173061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174885 N/A 50.842±15.07 N/A N/A 35.281±3.63 N/A N/A N/A N/A 64.759±0.00 N/A 64.489±6.41 N/A N/A
ENSMUSG00000027412 ENSMUST00000040872 0.888±0.27 N/A 6.013±0.90 N/A 0.887±0.00 8.274±1.00 N/A 1.301±0.25 0.446±0.27 1.112±0.07 1.437±0.00 1.497±0.57 3.481±0.59 0.822±0.16
ENSMUST00000109455 N/A N/A N/A N/A 1.367±0.00 N/A N/A 1.305±0.71 0.620±0.29 1.732±0.13 N/A 1.862±0.93 N/A N/A
ENSMUST00000109456 2.971±0.47 9.411±1.71 2.602±0.69 N/A 0.960±0.00 N/A 0.979±0.21 0.945±0.37 0.235±0.11 1.561±0.56 0.756±0.39 3.496±1.69 1.973±0.44 1.063±0.09
ENSMUST00000109457 1.723±0.00 7.532±3.33 1.314±0.00 0.168±0.00 1.535±0.66 3.327±0.83 0.346±0.02 1.998±0.17 0.527±0.37 1.905±0.55 0.532±0.00 2.260±0.69 1.473±0.63 1.963±0.13
ENSMUST00000124920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.463±0.00 8.236±0.00 10.115±0.00
ENSMUSG00000035877 ENSMUST00000103111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.712±0.01 N/A N/A N/A
ENSMUST00000103112 7.768±0.74 8.232±0.86 3.234±0.42 6.112±0.48 4.833±0.64 2.710±0.41 3.947±0.31 10.086±1.03 4.543±3.67 9.168±1.27 2.013±0.31 8.238±1.22 1.749±0.00 4.210±0.74
ENSMUST00000109460 N/A 7.044±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.455±3.18
ENSMUST00000127201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081854 ENSMUST00000118983 0.118±0.00 N/A 0.009±0.00 0.072±0.01 0.110±0.03 N/A 0.055±0.02 0.098±0.07 0.087±0.05 0.123±0.04 N/A 0.195±0.11 0.070±0.00 0.257±0.17
ENSMUSG00000085303 ENSMUST00000142212 0.063±0.03 0.408±0.18 0.094±0.01 0.012±0.00 0.067±0.04 0.136±0.05 0.088±0.03 0.244±0.03 0.064±0.08 0.228±0.04 0.052±0.04 0.146±0.06 0.095±0.06 0.099±0.04

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