C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine and glycine-rich protein 2 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027425 Csrp2bp 10090 + 2:144368983-144407676 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028911 Csrp2bp-002 144368983-144407676 protein_coding
  ENSMUST00000125398 Csrp2bp-007 144402547-144404353 protein_coding
  ENSMUST00000130654 Csrp2bp-006 144375852-144400773 processed_transcript
  ENSMUST00000131836 Csrp2bp-005 144375387-144389257 processed_transcript
  ENSMUST00000137611 Csrp2bp-010 144388989-144393448 processed_transcript
  ENSMUST00000139812 Csrp2bp-008 144404078-144407676 protein_coding
  ENSMUST00000143318 Csrp2bp-009 144388975-144393467 retained_intron
  ENSMUST00000147747 Csrp2bp-001 144368999-144407676 protein_coding
  ENSMUST00000148500 Csrp2bp-003 144402347-144407675 retained_intron
  ENSMUST00000156410 Csrp2bp-004 144373803-144393402 nonsense_mediated_decay
  ENSMUST00000171261 Csrp2bp-011 144368988-144373393 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028911ENSMUST00000139812ENSMUST00000147747ENSMUST00000148500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028911 4.332±0.52 2.181±0.98 6.362±0.12 7.235±2.66 2.834±1.21 2.416±0.60 2.474±1.33 5.117±0.97 3.251±1.89 6.001±1.83 5.186±0.80 4.685±2.56 14.807±5.23 1.234±0.41
ENSMUST00000139812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.666±0.73 N/A N/A
ENSMUST00000147747 N/A 3.959±1.27 N/A 4.130±0.00 3.055±0.82 1.859±0.48 N/A 2.872±0.87 2.132±0.74 2.156±0.49 0.744±0.04 2.748±0.82 9.518±0.00 0.693±0.33
ENSMUST00000148500 4.488±0.69 1.779±0.00 4.657±1.02 4.283±1.19 3.825±0.64 4.405±0.60 2.198±0.16 5.365±1.20 3.963±1.27 4.557±0.86 N/A 5.393±1.61 5.981±0.21 0.684±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 IMP G2/M transition of mitotic cell cycle
GO:0004402 ISO histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 IEA cytoplasm
GO:0016573 IMP histone acetylation
GO:0043966 IEA histone H3 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041708 csrp2bp cysteine and glycine-rich protein 2 binding protein protein_coding Danio_rerio
ENSG00000149474 CSRP2BP CSRP2 binding protein protein_coding Homo_sapiens

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