C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CSRP2 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149474 CSRP2BP 9606 + 20:18138118-18188387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377681 CSRP2BP-007 18142452-18188387 protein_coding
  ENST00000435364 CSRP2BP-001 18142320-18188387 protein_coding
  ENST00000464792 CSRP2BP-002 18138118-18142829 protein_coding
  ENST00000484001 CSRP2BP-004 18138206-18142546 processed_transcript
  ENST00000489422 CSRP2BP-006 18138206-18142457 processed_transcript
  ENST00000489634 CSRP2BP-005 18145099-18188387 protein_coding
  ENST00000492286 CSRP2BP-003 18138237-18142421 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377681ENST00000435364ENST00000464792ENST00000489634
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377681 1.122±0.00 1.763±0.35 0.741±0.00 1.332±0.00 2.943±0.00 2.541±0.00 0.557±0.20 1.502±0.00 1.614±0.56 3.409±1.31 3.790±0.78 3.986±1.72
ENST00000435364 0.528±0.00 1.221±0.00 0.595±0.00 4.132±0.00 N/A 1.284±0.26 1.254±0.33 N/A N/A 2.954±1.41 2.021±0.40 4.080±0.00
ENST00000464792 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.784±0.00 N/A N/A
ENST00000489634 N/A N/A N/A 0.629±0.00 N/A N/A N/A N/A N/A N/A 3.732±2.76 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 IEA G2/M transition of mitotic cell cycle
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IPI nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 IEA cytoplasm
GO:0006325 TAS chromatin organization
GO:0008080 IEA N-acetyltransferase activity
GO:0016573 IEA histone acetylation
GO:0030274 NAS LIM domain binding
GO:0043966 IDA histone H3 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041708 csrp2bp cysteine and glycine-rich protein 2 binding protein protein_coding Danio_rerio
ENSMUSG00000027425 Csrp2bp cysteine and glycine-rich protein 2 binding protein protein_coding Mus_musculus

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