C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GDNF-inducible zinc finger protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027439 Gzf1 10090 + 2:148681023-148692949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028928 Gzf1-001 148681023-148692949 protein_coding
  ENSMUST00000131292 Gzf1-002 148681211-148684049 protein_coding
  ENSMUST00000151362 Gzf1-003 148684612-148690215 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028928ENSMUST00000151362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028928 6.865±1.27 5.028±1.22 4.727±0.43 5.041±0.47 3.905±0.61 3.305±0.38 3.721±0.34 5.693±1.06 4.334±1.55 4.790±0.58 4.827±1.29 6.627±2.45 6.878±1.18 3.129±1.03
ENSMUST00000151362 N/A 4.471±0.00 N/A N/A 3.299±0.37 2.708±0.68 N/A N/A N/A N/A N/A 6.105±1.48 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023L CIL_00023L_0002 CGP 2:148672601-148692949
CIL_0004MO CIL_0004MO_0003 CGP 2:148681023-148732467

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001206 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001658 IMP branching involved in ureteric bud morphogenesis
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0043565 ISS sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076380 hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like protein_coding Danio_rerio
ENSG00000125812 GZF1 GDNF-inducible zinc finger protein 1 protein_coding Homo_sapiens

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