C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GDNF-inducible zinc finger protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125812 GZF1 9606 + 20:23362182-23373063 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338121 GZF1-003 23362182-23373063 protein_coding
  ENST00000377051 GZF1-201 23364384-23373045 protein_coding
  ENST00000424216 GZF1-004 23362320-23364529 protein_coding
  ENST00000461789 GZF1-002 23365219-23368907 processed_transcript
  ENST00000477239 GZF1-001 23368871-23370421 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338121ENST00000377051ENST00000477239
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338121 0.796±0.00 N/A 1.403±0.00 0.869±0.00 1.164±0.43 1.626±0.00 N/A 2.621±0.00 0.604±0.00 N/A 2.571±0.87 1.183±0.00 N/A
ENST00000377051 1.161±0.00 3.225±0.00 3.125±0.96 0.882±0.00 0.626±0.00 0.423±0.16 2.610±1.46 1.342±0.00 0.897±0.00 2.128±0.00 2.258±0.30 1.476±0.33 6.087±0.51
ENST00000477239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.783±0.00 3.004±0.00 19.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023L CIL_00023L_0001 CGP 20:23350736-23373063
CIL_0004MO CIL_0004MO_0002 CGP 20:23362182-23421519

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076380 hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like protein_coding Danio_rerio
ENSMUSG00000027439 Gzf1 GDNF-inducible zinc finger protein 1 protein_coding Mus_musculus

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