C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythrocyte protein band 4.1-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027624 Epb4.1l1 10090 + 2:156420909-156543214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029155 Epb4.1l1-201 156475837-156543214 protein_coding
  ENSMUST00000103135 Epb4.1l1-007 156475883-156543214 protein_coding
  ENSMUST00000103136 Epb4.1l1-005 156421101-156543214 protein_coding
  ENSMUST00000103137 Epb4.1l1-001 156420909-156543214 protein_coding
  ENSMUST00000109572 Epb4.1l1-008 156493903-156543214 protein_coding
  ENSMUST00000109574 Epb4.1l1-002 156421048-156543214 protein_coding
  ENSMUST00000109577 Epb4.1l1-006 156421112-156543214 protein_coding
  ENSMUST00000125153 Epb4.1l1-003 156421084-156522764 protein_coding
  ENSMUST00000129999 Epb4.1l1-012 156537357-156540326 processed_transcript
  ENSMUST00000137067 Epb4.1l1-011 156533507-156539986 retained_intron
  ENSMUST00000141109 Epb4.1l1-009 156475550-156499674 processed_transcript
  ENSMUST00000142048 Epb4.1l1-004 156421052-156502428 processed_transcript
  ENSMUST00000144013 Epb4.1l1-010 156506394-156514158 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029155ENSMUST00000103135ENSMUST00000103136ENSMUST00000103137ENSMUST00000109572ENSMUST00000109574ENSMUST00000109577ENSMUST00000125153ENSMUST00000129999ENSMUST00000141109ENSMUST00000144013
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029155 6.982±1.09 8.021±1.76 N/A 11.912±5.57 5.403±1.06 2.053±0.15 1.048±0.00 2.257±0.48 0.051±0.01 1.382±0.23 0.151±0.01 5.711±2.27 N/A 0.380±0.10
ENSMUST00000103135 N/A N/A N/A 16.784±11.79 2.747±0.00 N/A 0.443±0.09 N/A N/A N/A N/A N/A N/A 0.191±0.05
ENSMUST00000103136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00
ENSMUST00000103137 N/A N/A N/A 14.338±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.845±0.00 4.086±1.35 0.077±0.00
ENSMUST00000109574 6.276±3.56 6.352±1.06 4.556±0.66 N/A 4.975±2.13 4.756±1.95 0.429±0.18 5.637±1.04 0.620±0.39 2.233±0.55 0.344±0.07 6.789±2.60 6.289±3.17 0.309±0.06
ENSMUST00000109577 11.718±0.00 N/A 9.588±0.82 N/A 2.582±0.00 4.478±1.63 0.842±0.33 3.527±0.95 0.518±0.26 2.467±1.11 0.592±0.11 5.215±1.56 7.061±3.66 0.646±0.22
ENSMUST00000125153 N/A N/A N/A 68.096±0.00 N/A N/A N/A N/A N/A N/A N/A 8.337±0.00 N/A N/A
ENSMUST00000129999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.121±0.00 36.568±0.00 69.396±9.15 3.464±0.00
ENSMUST00000141109 N/A 10.051±2.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.742±1.86 N/A N/A
ENSMUST00000144013 N/A N/A N/A N/A 25.491±3.10 N/A N/A N/A N/A N/A N/A N/A N/A 2.643±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056R CIL_00056R_0002 CGP 2:156312299-156543214
CIL_0000WO CIL_0000WO_0002 CGP 2:156420909-156568972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding
GO:0019898 IEA extrinsic component of membrane
GO:0030866 IEA cortical actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076364 EPB41L1 erythrocyte membrane protein band 4.1-like 1 protein_coding Danio_rerio
ENSG00000088367 EPB41L1 erythrocyte membrane protein band 4.1-like 1 protein_coding Homo_sapiens

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