C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-Coenzyme A dehydrogenase family, member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027710 Acad9 10090 + 3:36065979-36094944 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000011492 Acad9-001 36065979-36094944 protein_coding
  ENSMUST00000134736 Acad9-008 36089837-36091372 retained_intron
  ENSMUST00000138882 Acad9-003 36080221-36091152 retained_intron
  ENSMUST00000141145 Acad9-006 36078452-36088892 nonsense_mediated_decay
  ENSMUST00000146170 Acad9-004 36076769-36080706 retained_intron
  ENSMUST00000151570 Acad9-005 36080146-36088544 protein_coding
  ENSMUST00000151634 Acad9-007 36089234-36091270 processed_transcript
  ENSMUST00000152764 Acad9-002 36066072-36091135 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000011492ENSMUST00000134736ENSMUST00000138882ENSMUST00000141145ENSMUST00000151634ENSMUST00000152764
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000011492 2.724±0.31 2.343±0.92 1.777±0.21 2.704±0.86 1.688±0.47 1.442±0.24 1.826±0.25 4.864±0.80 2.153±0.75 1.784±0.19 1.382±0.26 3.143±1.09 1.179±0.52 0.653±0.16
ENSMUST00000134736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.224±0.77 13.050±1.49 6.746±1.13 N/A
ENSMUST00000138882 N/A N/A N/A N/A 4.311±0.00 N/A N/A N/A N/A N/A N/A 2.952±0.00 N/A N/A
ENSMUST00000141145 N/A N/A N/A 36.554±0.00 N/A N/A N/A N/A 9.096±0.00 N/A N/A 40.647±0.00 21.866±12.95 4.052±0.00
ENSMUST00000151634 12.481±1.87 N/A 7.894±0.00 N/A N/A N/A N/A 12.548±1.67 7.546±0.87 N/A 7.480±0.00 14.221±1.02 11.154±1.91 N/A
ENSMUST00000152764 4.017±1.20 4.219±2.07 N/A 5.686±0.00 3.812±0.90 3.088±0.95 3.482±0.66 4.918±1.06 3.698±1.35 2.853±0.37 3.720±0.40 3.898±1.02 3.609±1.63 0.705±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0002 VISTA 3:35858852-36462657

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0030425 IEA dendrite
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055620 acad9 acyl-CoA dehydrogenase family, member 9 protein_coding Danio_rerio
ENSG00000177646 ACAD9 acyl-CoA dehydrogenase family, member 9 protein_coding Homo_sapiens

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