C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A dehydrogenase family, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000011492 Acad9-001 ENSMUSG00000027710 10090 + 3:36065979-36094944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000011492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000011492 2.724±0.31 2.343±0.92 1.777±0.21 2.704±0.86 1.688±0.47 1.442±0.24 1.826±0.25 4.864±0.80 2.153±0.75 1.784±0.19 1.382±0.26 3.143±1.09 1.179±0.52 0.653±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0002 VISTA 3:35858852-36462657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0030425 IEA dendrite
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308982 ACAD9-001 protein_coding Homo_sapiens 0 1840
ENST00000505192 ACAD9-003 nonsense_mediated_decay Homo_sapiens 0 1179
ENST00000505867 ACAD9-005 nonsense_mediated_decay Homo_sapiens 0 1690
ENST00000508971 ACAD9-009 nonsense_mediated_decay Homo_sapiens 0 1205
ENST00000511227 ACAD9-002 nonsense_mediated_decay Homo_sapiens 0 1808
ENST00000511325 ACAD9-008 retained_intron Homo_sapiens 0 366
ENST00000511526 ACAD9-007 processed_transcript Homo_sapiens 0 1164
ENST00000512801 ACAD9-012 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000514643 ACAD9-011 nonsense_mediated_decay Homo_sapiens 0 667
ENST00000620948 ACAD9-201 protein_coding Homo_sapiens 0 1810

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