C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-fold modifier 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027746 Ufm1 10090 - 3:53855212-53863830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029309 Ufm1-002 53857943-53863762 nonsense_mediated_decay
  ENSMUST00000122330 Ufm1-004 53858811-53863766 protein_coding
  ENSMUST00000146598 Ufm1-001 53855212-53863830 protein_coding
  ENSMUST00000148338 Ufm1-003 53857822-53863689 retained_intron
  ENSMUST00000152414 Ufm1-005 53859616-53863762 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146598ENSMUST00000148338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146598 5.804±1.57 3.954±0.77 11.608±1.40 9.127±1.32 3.590±1.17 5.037±1.34 2.825±0.73 6.463±1.07 5.422±2.10 5.330±0.20 4.104±2.29 5.471±1.91 13.499±3.88 1.934±0.10
ENSMUST00000148338 16.015±3.47 2.738±0.00 N/A N/A N/A 3.606±1.25 6.408±0.94 N/A 11.270±5.05 N/A N/A 5.315±0.65 44.151±3.86 4.167±0.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0034976 ISO response to endoplasmic reticulum stress
GO:0070062 IEA extracellular vesicular exosome
GO:0071569 IDA protein ufmylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043857 ufm1 ubiquitin-fold modifier 1 protein_coding Danio_rerio
ENSG00000120686 UFM1 ubiquitin-fold modifier 1 protein_coding Homo_sapiens

Loading