C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-fold modifier 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120686 UFM1 9606 + 13:38349849-38363619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000239878 UFM1-001 38349881-38363619 protein_coding
  ENST00000379649 UFM1-003 38349851-38361125 protein_coding
  ENST00000437952 UFM1-005 38349996-38359781 protein_coding
  ENST00000464423 UFM1-004 38349886-38354558 retained_intron
  ENST00000494372 UFM1-002 38349849-38354885 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000239878ENST00000379649
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000239878 1.129±0.00 8.724±0.00 5.652±0.00 5.615±0.00 3.229±0.00 8.639±0.00 4.899±0.00 4.656±0.00 0.679±0.00 10.575±6.74 5.899±6.55 6.044±0.00
ENST00000379649 N/A N/A N/A 7.693±0.00 N/A N/A N/A N/A 0.701±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CS CIL_0006CS_0002 CGP 13:37636636-38363619
CIL_0000HL CIL_0000HL_0002 CGP 13:38349849-38887131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0034976 IDA response to endoplasmic reticulum stress
GO:0070062 IDA extracellular vesicular exosome
GO:0071569 IDA protein ufmylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043857 ufm1 ubiquitin-fold modifier 1 protein_coding Danio_rerio
ENSMUSG00000027746 Ufm1 ubiquitin-fold modifier 1 protein_coding Mus_musculus

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