C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exosome component 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027752 Exosc8 10090 - 3:54728678-54735393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029316 Exosc8-001 54728678-54735393 protein_coding
  ENSMUST00000125632 Exosc8-010 54728681-54729458 retained_intron
  ENSMUST00000127112 Exosc8-002 54731298-54735367 retained_intron
  ENSMUST00000134892 Exosc8-006 54729841-54734802 retained_intron
  ENSMUST00000135935 Exosc8-005 54733601-54735035 retained_intron
  ENSMUST00000140935 Exosc8-007 54732142-54734337 retained_intron
  ENSMUST00000142377 Exosc8-009 54732152-54733223 retained_intron
  ENSMUST00000150923 Exosc8-003 54728682-54735037 retained_intron
  ENSMUST00000153224 Exosc8-004 54731993-54735046 protein_coding
  ENSMUST00000154787 Exosc8-008 54729853-54734313 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverMuscleOvaryPlacentaENSMUST00000029316ENSMUST00000125632ENSMUST00000150923
Transcript ID Bladder Brain Heart Liver Muscle Ovary Placenta
ENSMUST00000029316 12.602±0.00 14.636±8.30 4.684±0.33 19.175±15.34 5.079±0.47 17.569±0.00 26.807±0.58
ENSMUST00000125632 N/A 30.677±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150923 N/A N/A N/A 6.791±0.51 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000178 ISS exosome (RNase complex)
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0017091 IEA AU-rich element binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068755 exosc8 exosome component 8 protein_coding Danio_rerio
ENSG00000120699 EXOSC8 exosome component 8 protein_coding Homo_sapiens

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