C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027971 Ndst4 10090 + 3:125404094-125724986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000144344 Ndst4-003 125404292-125612408 protein_coding
  ENSMUST00000147016 Ndst4-002 125404094-125686644 retained_intron
  ENSMUST00000172632 Ndst4-004 125680997-125690938 processed_transcript
  ENSMUST00000173932 Ndst4-001 125404094-125724986 protein_coding
  ENSMUST00000174648 Ndst4-005 125680988-125724986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144344ENSMUST00000172632ENSMUST00000173932ENSMUST00000174648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144344 N/A 0.119±0.04 N/A N/A 0.056±0.03 0.112±0.07 0.016±0.00 N/A 0.005±0.00 0.024±0.00 N/A 0.093±0.02 0.005±0.00 0.021±0.00
ENSMUST00000172632 N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A 31.251±3.03
ENSMUST00000173932 N/A N/A 0.090±0.01 0.956±0.02 0.023±0.00 0.113±0.06 N/A 0.040±0.00 0.002±0.00 0.033±0.01 N/A 0.208±0.07 0.003±0.00 N/A
ENSMUST00000174648 0.023±0.00 N/A N/A N/A 0.035±0.01 0.121±0.01 0.037±0.00 0.028±0.01 0.013±0.00 N/A 0.022±0.00 0.120±0.03 N/A 8.483±4.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005L CIL_00005L_0002 CGP 3:125404094-125938550

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041776 ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein_coding Danio_rerio
ENSG00000138653 NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 protein_coding Homo_sapiens

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