C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173932 Ndst4-001 ENSMUSG00000027971 10090 + 3:125404094-125724986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000173932
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000173932 0.090±0.01 0.956±0.02 0.023±0.00 0.113±0.06 0.040±0.00 0.002±0.00 0.033±0.01 0.208±0.07 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005L CIL_00005L_0002 CGP 3:125404094-125938550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IDA sulfotransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264363 NDST4-001 protein_coding Homo_sapiens 0 3770
ENST00000504854 NDST4-003 nonsense_mediated_decay Homo_sapiens 0 1304
ENST00000514570 NDST4-002 retained_intron Homo_sapiens 0 514
ENST00000613194 NDST4-201 protein_coding Homo_sapiens 0 3136

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