C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 92, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028218 Fam92a 10090 - 4:12153409-12172015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087052 Fam92a-002 12153724-12171995 protein_coding
  ENSMUST00000108285 Fam92a-001 12153409-12172015 protein_coding
  ENSMUST00000126012 Fam92a-006 12164121-12171871 nonsense_mediated_decay
  ENSMUST00000126808 Fam92a-004 12165343-12171995 retained_intron
  ENSMUST00000152219 Fam92a-005 12165610-12171734 retained_intron
  ENSMUST00000154416 Fam92a-007 12155711-12171168 protein_coding
  ENSMUST00000172728 Fam92a-008 12153857-12161124 processed_transcript
  ENSMUST00000177837 Fam92a-201 12153723-12172015 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087052ENSMUST00000108285ENSMUST00000126012ENSMUST00000126808ENSMUST00000152219ENSMUST00000154416ENSMUST00000172728ENSMUST00000177837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087052 1.302±0.64 2.127±1.38 4.120±0.18 N/A 1.386±0.75 0.540±0.05 0.874±0.17 1.409±0.06 1.631±0.28 N/A 1.173±0.42 4.860±1.82 3.141±0.18 5.348±0.00
ENSMUST00000108285 3.269±1.20 1.652±0.62 3.273±0.07 21.541±7.18 1.994±0.40 1.628±0.58 3.207±0.44 2.089±1.01 2.615±2.80 3.075±0.68 2.187±0.52 8.441±4.49 6.708±3.57 9.744±4.12
ENSMUST00000126012 2.909±1.13 N/A N/A N/A 1.561±0.16 1.818±0.20 N/A 3.152±1.58 1.514±0.43 1.586±0.21 N/A 4.613±1.28 N/A 9.583±1.30
ENSMUST00000126808 0.607±0.21 0.472±0.21 N/A N/A 0.284±0.10 0.190±0.08 N/A 0.345±0.05 0.108±0.00 0.304±0.06 N/A 0.724±0.19 0.625±0.00 N/A
ENSMUST00000152219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.051±0.00 N/A
ENSMUST00000154416 N/A N/A N/A 20.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172728 N/A N/A N/A 54.247±0.00 N/A N/A N/A N/A 1.170±0.00 N/A N/A 41.813±0.00 22.264±0.00 38.710±0.00
ENSMUST00000177837 N/A N/A N/A N/A N/A 0.588±0.00 1.044±0.00 1.159±0.00 N/A 0.589±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004436 fam92a1 family with sequence similarity 92, member A1 protein_coding Danio_rerio
ENSG00000188343 FAM92A1 family with sequence similarity 92, member A1 protein_coding Homo_sapiens

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