C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 92, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126012 Fam92a-006 ENSMUSG00000028218 10090 - 4:12164121-12171871 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryTestisENSMUST00000126012
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000126012 2.909±1.13 1.561±0.16 1.818±0.20 3.152±1.58 1.514±0.43 1.586±0.21 4.613±1.28 9.583±1.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359421 FAM92A1-004 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000423990 FAM92A1-005 protein_coding Homo_sapiens 0 335
ENST00000452913 FAM92A1-002 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000502308 FAM92A1P2-002 processed_transcript Homo_sapiens 0 300
ENST00000504766 FAM92A1P2-001 transcribed_processed_pseudogene Homo_sapiens 0 254
ENST00000518116 FAM92A1-006 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000518322 FAM92A1-001 protein_coding Homo_sapiens 0 337
ENST00000518829 FAM92A1-007 protein_coding Homo_sapiens 0 327
ENST00000519135 FAM92A1-014 protein_coding Homo_sapiens 0 226
ENST00000520937 FAM92A1-010 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000520955 FAM92A1-012 protein_coding Homo_sapiens 0 285
ENST00000522324 FAM92A1-008 protein_coding Homo_sapiens 0 377
ENST00000522803 FAM92A1-009 protein_coding Homo_sapiens 0 442
ENST00000523453 FAM92A1-011 protein_coding Homo_sapiens 0 327
ENST00000523475 FAM92A1-013 protein_coding Homo_sapiens 0 327
ENST00000523577 FAM92A1-003 retained_intron Homo_sapiens 0 226
ENST00000620645 FAM92A1-201 protein_coding Homo_sapiens 0 335

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