C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: short chain dehydrogenase/reductase family 16C, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028236 Sdr16c5 10090 - 4:3995936-4019663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040925 Sdr16c5-001 3995936-4019663 protein_coding
  ENSMUST00000126274 Sdr16c5-002 4012341-4016621 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleENSMUST00000040925ENSMUST00000126274
Transcript ID Bladder Brain Breast Liver Lung Muscle
ENSMUST00000040925 0.023±0.00 0.027±0.02 0.386±0.16 0.247±0.14 0.388±0.19 0.034±0.01
ENSMUST00000126274 N/A N/A 0.276±0.00 N/A N/A 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004745 IEA retinol dehydrogenase activity
GO:0005789 IEA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0042572 IEA retinol metabolic process
GO:0042574 IEA retinal metabolic process
GO:0043616 IEA keratinocyte proliferation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016233 sdr16c5a short chain dehydrogenase/reductase family 16C, member 5a protein_coding Danio_rerio
ENSDARG00000017794 sdr16c5b short chain dehydrogenase/reductase family 16C, member 5b protein_coding Danio_rerio
ENSG00000170786 SDR16C5 short chain dehydrogenase/reductase family 16C, member 5 protein_coding Homo_sapiens

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