C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: short chain dehydrogenase/reductase family 16C, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040925 Sdr16c5-001 ENSMUSG00000028236 10090 - 4:3995936-4019663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleENSMUST00000040925
Transcript ID Bladder Brain Breast Liver Lung Muscle
ENSMUST00000040925 0.023±0.00 0.027±0.02 0.386±0.16 0.247±0.14 0.388±0.19 0.034±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004745 IEA retinol dehydrogenase activity
GO:0005789 IEA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0042572 IEA retinol metabolic process
GO:0042574 IEA retinal metabolic process
GO:0043616 IEA keratinocyte proliferation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303749 SDR16C5-001 protein_coding Homo_sapiens 0 872
ENST00000396721 SDR16C5-003 protein_coding Homo_sapiens 0 429
ENST00000522671 SDR16C5-002 protein_coding Homo_sapiens 0 819

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