C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 44, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028360 Slc44a5 10090 + 3:153973436-154271722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089948 Slc44a5-001 153973436-154271722 protein_coding
  ENSMUST00000128362 Slc44a5-003 154222482-154225525 processed_transcript
  ENSMUST00000144677 Slc44a5-002 154257474-154271722 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089948ENSMUST00000128362ENSMUST00000144677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089948 0.052±0.04 N/A 0.024±0.00 3.031±0.30 0.059±0.03 0.066±0.03 0.043±0.01 0.015±0.01 0.093±0.04 N/A 0.021±0.01 0.055±0.03 0.026±0.02 1.578±0.30
ENSMUST00000128362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.09 N/A N/A
ENSMUST00000144677 0.046±0.01 0.032±0.01 0.017±0.01 4.243±0.32 0.036±0.01 0.070±0.05 0.057±0.01 0.015±0.01 0.027±0.02 0.032±0.02 0.016±0.00 0.074±0.05 0.010±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047K CIL_00047K_0002 CGP 3:153973436-154330561

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017398 slc44a5a solute carrier family 44, member 5a protein_coding Danio_rerio
ENSDARG00000057419 slc44a5b solute carrier family 44, member 5b protein_coding Danio_rerio
ENSG00000137968 SLC44A5 solute carrier family 44, member 5 protein_coding Homo_sapiens

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