C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00047K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057419-ENSDARG00000042145 CGP 7955 8:18358511-18446215
GeneTranscriptPositionBiotype
ENSDARG00000042145 (lhx8b)
LIM homeobox 8b
ENSDART00000061776 (lhx8b-201) 18439320-18446215 protein_coding
ENSDART00000147344 (lhx8b-001) 18440829-18446214 protein_coding
ENSDARG00000057419 (slc44a5b)
solute carrier family 44, member 5b
ENSDART00000080079 (slc44a5b-201) 18358511-18436328 protein_coding
ENSDART00000134660 (slc44a5b-001) 18403969-18436355 protein_coding
CIL_00047K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028360-ENSMUSG00000096225 CGP 10090 3:153973436-154330561
GeneTranscriptPositionBiotype
ENSMUSG00000028360 (Slc44a5)
solute carrier family 44, member 5
ENSMUST00000089948 (Slc44a5-001) 153973436-154271722 protein_coding
ENSMUST00000128362 (Slc44a5-003) 154222482-154225525 processed_transcript
ENSMUST00000144677 (Slc44a5-002) 154257474-154271722 retained_intron
ENSMUSG00000090114 (Gm3076)
predicted gene 3076
ENSMUST00000161613 (Gm3076-001) 154132340-154132790 processed_pseudogene
ENSMUSG00000096225 (Lhx8)
LIM homeobox protein 8
ENSMUST00000167744 (Lhx8-002) 154322257-154328634 protein_coding
ENSMUST00000168508 (Lhx8-005) 154316743-154324883 retained_intron
ENSMUST00000169671 (Lhx8-004) 154306978-154328166 nonsense_mediated_decay
ENSMUST00000176163 (Lhx8-003) 154306296-154330059 protein_coding
ENSMUST00000177846 (Lhx8-001) 154306294-154330561 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047K_0001ENSDARG00000042145ENSDART00000061776ENSDART00000147344ENSDARG00000057419ENSDART00000080079ENSDART00000134660CIL_00047K_0002ENSMUSG00000028360ENSMUST00000089948ENSMUST00000128362ENSMUST00000144677ENSMUSG00000090114ENSMUST00000161613ENSMUSG00000096225ENSMUST00000167744ENSMUST00000168508ENSMUST00000169671ENSMUST00000176163ENSMUST00000177846
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047K_0001ENSDARG00000042145ENSDART00000061776ENSDART00000147344ENSDARG00000057419ENSDART00000080079ENSDART00000134660CIL_00047K_0002ENSMUSG00000028360ENSMUST00000089948ENSMUST00000128362ENSMUST00000144677ENSMUSG00000090114ENSMUST00000161613ENSMUSG00000096225ENSMUST00000167744ENSMUST00000168508ENSMUST00000169671ENSMUST00000176163ENSMUST00000177846
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042145 ENSDART00000061776 N/A N/A N/A 0.121±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147344 N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057419 ENSDART00000080079 N/A N/A N/A 3.332±0.49 N/A N/A 1.105±0.00 N/A 0.894±0.00 N/A 0.876±0.00 N/A N/A N/A
ENSDART00000134660 N/A N/A N/A 1.066±0.00 N/A N/A 2.683±0.00 N/A 0.546±0.00 N/A 0.137±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028360 ENSMUST00000089948 0.052±0.04 N/A 0.024±0.00 3.031±0.30 0.059±0.03 0.066±0.03 0.043±0.01 0.015±0.01 0.093±0.04 N/A 0.021±0.01 0.055±0.03 0.026±0.02 1.578±0.30
ENSMUST00000128362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.09 N/A N/A
ENSMUST00000144677 0.046±0.01 0.032±0.01 0.017±0.01 4.243±0.32 0.036±0.01 0.070±0.05 0.057±0.01 0.015±0.01 0.027±0.02 0.032±0.02 0.016±0.00 0.074±0.05 0.010±0.01 N/A
ENSMUSG00000090114 ENSMUST00000161613 N/A N/A 0.070±0.00 0.099±0.05 0.167±0.00 N/A N/A N/A 0.224±0.17 N/A 0.099±0.04 N/A 0.058±0.03 0.123±0.00
ENSMUSG00000096225 ENSMUST00000167744 N/A 0.229±0.12 N/A 1.473±0.00 0.234±0.00 0.078±0.00 0.132±0.01 0.079±0.00 0.017±0.00 0.051±0.00 N/A 1.576±1.08 0.161±0.07 0.199±0.00
ENSMUST00000168508 N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A 0.009±0.00 N/A 0.015±0.00 0.929±0.50 0.201±0.11 0.254±0.00
ENSMUST00000169671 N/A 0.355±0.00 N/A 1.528±0.52 1.472±1.13 N/A 0.040±0.00 N/A 0.020±0.00 0.247±0.00 0.145±0.00 1.797±1.79 0.717±0.70 0.208±0.00
ENSMUST00000176163 N/A 0.065±0.00 N/A 0.178±0.00 N/A 0.081±0.00 0.045±0.01 0.021±0.00 0.032±0.00 0.186±0.00 0.029±0.00 N/A 0.130±0.06 N/A
ENSMUST00000177846 0.034±0.00 0.120±0.02 N/A 2.010±1.78 0.913±0.11 0.043±0.00 N/A 0.119±0.06 0.020±0.01 0.043±0.03 0.099±0.00 0.618±0.20 0.013±0.00 0.277±0.08

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