C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class I, type 8B, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028457 Atp8b5 10090 + 4:43267159-43373833 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056010 Atp8b5-002 43267159-43344582 retained_intron
  ENSMUST00000102953 Atp8b5-003 43267191-43326560 protein_coding
  ENSMUST00000107937 Atp8b5-005 43267185-43373833 nonsense_mediated_decay
  ENSMUST00000107942 Atp8b5-001 43267170-43373831 protein_coding
  ENSMUST00000136262 Atp8b5-004 43267185-43324884 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056010ENSMUST00000102953ENSMUST00000107937ENSMUST00000107942ENSMUST00000136262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056010 N/A N/A 0.116±0.00 N/A N/A N/A N/A 0.164±0.00 0.053±0.00 0.041±0.00 N/A N/A 0.267±0.15 N/A
ENSMUST00000102953 0.044±0.00 N/A 0.069±0.01 0.092±0.07 N/A N/A 0.024±0.00 N/A 0.029±0.00 0.069±0.03 0.016±0.00 0.132±0.03 N/A N/A
ENSMUST00000107937 0.073±0.02 N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A 0.067±0.01 N/A 0.237±0.14 N/A N/A
ENSMUST00000107942 0.123±0.08 0.172±0.05 0.048±0.00 0.137±0.00 0.558±0.15 0.285±0.05 0.063±0.01 0.138±0.09 0.065±0.04 0.079±0.00 0.048±0.02 0.218±0.11 0.072±0.05 12.145±2.77
ENSMUST00000136262 N/A N/A N/A N/A N/A N/A N/A 0.485±0.00 0.085±0.00 N/A 0.088±0.00 0.696±0.00 0.455±0.27 65.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CH CIL_0001CH_0002 CGP 4:43267159-43427088

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001669 IDA acrosomal vesicle
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005548 IMP phospholipid transporter activity
GO:0007030 IMP Golgi organization
GO:0008152 IEA metabolic process
GO:0015914 IMP phospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062040 atp8b5a ATPase, class I, type 8B, member 5a protein_coding Danio_rerio
ENSDARG00000079235 atp8b5b ATPase, class I, type 8B, member 5b protein_coding Danio_rerio

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