C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001CH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062040-ENSDARG00000095288 CGP 7955 5:21044734-21110890
GeneTranscriptPositionBiotype
ENSDARG00000062040 (atp8b5a)
ATPase, class I, type 8B, member 5a 		ENSDART00000089173 (atp8b5a-201) 21044734-21079430 protein_coding
ENSDART00000139401 (atp8b5a-001) 21045015-21079577 protein_coding
ENSDARG00000095288 (rusc2)
RUN and SH3 domain containing 2 		ENSDART00000133247 (rusc2-001) 21097902-21110890 protein_coding
CIL_0001CH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028457-ENSMUSG00000035969 CGP 10090 4:43267159-43427088
GeneTranscriptPositionBiotype
ENSMUSG00000028457 (Atp8b5)
ATPase, class I, type 8B, member 5 		ENSMUST00000056010 (Atp8b5-002) 43267159-43344582 retained_intron
ENSMUST00000102953 (Atp8b5-003) 43267191-43326560 protein_coding
ENSMUST00000107937 (Atp8b5-005) 43267185-43373833 nonsense_mediated_decay
ENSMUST00000107942 (Atp8b5-001) 43267170-43373831 protein_coding
ENSMUST00000136262 (Atp8b5-004) 43267185-43324884 nonsense_mediated_decay
ENSMUSG00000035969 (Rusc2)
RUN and SH3 domain containing 2 		ENSMUST00000035645 (Rusc2-001) 43381979-43427088 protein_coding
ENSMUST00000098106 (Rusc2-003) 43406435-43427088 protein_coding
ENSMUST00000123447 (Rusc2-013) 43423591-43424011 retained_intron
ENSMUST00000125393 (Rusc2-002) 43401238-43427073 retained_intron
ENSMUST00000125399 (Rusc2-010) 43401253-43414739 protein_coding
ENSMUST00000131037 (Rusc2-018) 43382070-43416190 processed_transcript
ENSMUST00000131668 (Rusc2-004) 43414696-43427088 protein_coding
ENSMUST00000135216 (Rusc2-006) 43383449-43414840 protein_coding
ENSMUST00000136360 (Rusc2-009) 43384332-43414893 protein_coding
ENSMUST00000139198 (Rusc2-012) 43406557-43415179 protein_coding
ENSMUST00000144911 (Rusc2-005) 43382057-43414796 protein_coding
ENSMUST00000146710 (Rusc2-017) 43416438-43426365 processed_transcript
ENSMUST00000149221 (Rusc2-014) 43407329-43421802 protein_coding
ENSMUST00000149556 (Rusc2-011) 43406502-43422455 processed_transcript
ENSMUST00000150066 (Rusc2-008) 43384279-43421919 processed_transcript
ENSMUST00000152322 (Rusc2-007) 43383510-43414755 protein_coding
ENSMUST00000154754 (Rusc2-015) 43422492-43424373 retained_intron
ENSMUST00000173682 (Rusc2-016) 43414696-43426649 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CH_0001ENSDARG00000062040ENSDART00000089173ENSDART00000139401ENSDARG00000095288ENSDART00000133247CIL_0001CH_0002ENSMUSG00000028457ENSMUST00000056010ENSMUST00000102953ENSMUST00000107937ENSMUST00000107942ENSMUST00000136262ENSMUSG00000035969ENSMUST00000035645ENSMUST00000098106ENSMUST00000123447ENSMUST00000125393ENSMUST00000125399ENSMUST00000131037ENSMUST00000131668ENSMUST00000135216ENSMUST00000136360ENSMUST00000139198ENSMUST00000144911ENSMUST00000146710ENSMUST00000149221ENSMUST00000149556ENSMUST00000150066ENSMUST00000152322ENSMUST00000154754ENSMUST00000173682
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CH_0001ENSDARG00000062040ENSDART00000089173ENSDART00000139401ENSDARG00000095288ENSDART00000133247CIL_0001CH_0002ENSMUSG00000028457ENSMUST00000056010ENSMUST00000102953ENSMUST00000107937ENSMUST00000107942ENSMUST00000136262ENSMUSG00000035969ENSMUST00000035645ENSMUST00000098106ENSMUST00000125393ENSMUST00000131037ENSMUST00000131668ENSMUST00000154754ENSMUST00000173682
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062040 ENSDART00000089173 N/A N/A N/A 0.056±0.00 N/A N/A 0.993±0.69 1.271±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000139401 N/A N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000095288 ENSDART00000133247 N/A N/A N/A 21.705±0.00 N/A N/A 7.060±0.84 N/A 0.983±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028457 ENSMUST00000056010 N/A N/A 0.116±0.00 N/A N/A N/A N/A 0.164±0.00 0.053±0.00 0.041±0.00 N/A N/A 0.267±0.15 N/A
ENSMUST00000102953 0.044±0.00 N/A 0.069±0.01 0.092±0.07 N/A N/A 0.024±0.00 N/A 0.029±0.00 0.069±0.03 0.016±0.00 0.132±0.03 N/A N/A
ENSMUST00000107937 0.073±0.02 N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A 0.067±0.01 N/A 0.237±0.14 N/A N/A
ENSMUST00000107942 0.123±0.08 0.172±0.05 0.048±0.00 0.137±0.00 0.558±0.15 0.285±0.05 0.063±0.01 0.138±0.09 0.065±0.04 0.079±0.00 0.048±0.02 0.218±0.11 0.072±0.05 12.145±2.77
ENSMUST00000136262 N/A N/A N/A N/A N/A N/A N/A 0.485±0.00 0.085±0.00 N/A 0.088±0.00 0.696±0.00 0.455±0.27 65.101±0.00
ENSMUSG00000035969 ENSMUST00000035645 1.912±0.75 3.603±1.12 4.793±1.26 5.023±0.00 1.233±0.39 1.917±0.97 2.170±0.48 1.636±0.43 0.892±0.66 9.798±2.82 2.922±0.98 2.812±1.20 2.307±1.64 4.199±1.61
ENSMUST00000098106 1.845±0.62 1.964±0.62 2.240±0.80 9.932±6.76 0.758±0.45 1.016±0.28 1.652±0.23 1.129±0.24 0.255±0.28 8.281±0.88 1.388±0.37 2.373±0.75 4.720±3.79 1.077±0.00
ENSMUST00000123447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125393 1.109±0.00 1.552±0.00 N/A N/A 0.176±0.00 1.405±0.10 N/A N/A 0.295±0.23 N/A N/A 1.873±0.42 0.676±0.00 0.326±0.00
ENSMUST00000125399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.751±0.00 N/A N/A
ENSMUST00000131668 1.601±0.00 2.664±0.82 1.601±0.22 6.637±3.38 1.526±0.73 1.377±0.41 1.614±0.37 1.212±0.12 0.587±0.28 5.287±1.06 1.867±0.60 2.866±0.68 3.808±2.70 1.025±0.21
ENSMUST00000135216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.668±0.30 N/A N/A
ENSMUST00000173682 N/A N/A N/A 7.015±0.00 N/A N/A N/A N/A N/A N/A N/A 1.329±0.00 N/A 1.143±0.00

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