C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028546 Elavl4 10090 - 4:110203722-110351909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102722 Elavl4-005 110203737-110286889 protein_coding
  ENSMUST00000102723 Elavl4-002 110203737-110287527 protein_coding
  ENSMUST00000106597 Elavl4-004 110203737-110286889 protein_coding
  ENSMUST00000106598 Elavl4-003 110203722-110287527 protein_coding
  ENSMUST00000106600 Elavl4-006 110203737-110290272 protein_coding
  ENSMUST00000106601 Elavl4-007 110203737-110292722 protein_coding
  ENSMUST00000106603 Elavl4-001 110203737-110351909 protein_coding
  ENSMUST00000138972 Elavl4-012 110213217-110286616 protein_coding
  ENSMUST00000142722 Elavl4-008 110251294-110290893 protein_coding
  ENSMUST00000144554 Elavl4-010 110225580-110274162 processed_transcript
  ENSMUST00000153200 Elavl4-009 110206359-110223148 processed_transcript
  ENSMUST00000153906 Elavl4-011 110226609-110287527 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102722ENSMUST00000102723ENSMUST00000106597ENSMUST00000106598ENSMUST00000106600ENSMUST00000106601ENSMUST00000106603ENSMUST00000138972ENSMUST00000142722ENSMUST00000144554ENSMUST00000153200ENSMUST00000153906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102722 0.053±0.00 0.143±0.00 N/A 4.907±2.25 0.069±0.03 0.207±0.00 N/A 0.017±0.00 N/A 0.091±0.00 N/A 0.111±0.04 N/A N/A
ENSMUST00000102723 N/A 0.182±0.00 0.028±0.00 10.635±4.04 0.060±0.01 0.332±0.08 0.016±0.00 N/A 0.047±0.04 N/A N/A 0.126±0.00 N/A N/A
ENSMUST00000106597 0.035±0.00 0.181±0.00 N/A 14.631±2.06 0.144±0.00 0.435±0.20 N/A 0.063±0.00 0.020±0.00 N/A N/A N/A 0.018±0.00 N/A
ENSMUST00000106598 N/A N/A N/A 5.522±0.00 N/A 0.459±0.00 N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A
ENSMUST00000106600 N/A N/A N/A N/A N/A N/A 0.001±0.00 0.003±0.00 N/A N/A N/A 0.246±0.00 N/A N/A
ENSMUST00000106601 N/A 0.134±0.00 N/A N/A N/A N/A 0.006±0.00 0.045±0.03 0.007±0.00 0.039±0.01 N/A N/A N/A N/A
ENSMUST00000106603 N/A 0.250±0.06 0.019±0.00 N/A 0.055±0.00 N/A 0.020±0.02 0.043±0.01 0.023±0.01 0.017±0.00 0.009±0.00 0.192±0.14 0.030±0.00 0.734±0.19
ENSMUST00000138972 N/A 0.136±0.00 N/A N/A 0.316±0.00 N/A N/A N/A 0.048±0.03 N/A N/A 0.725±0.50 N/A 1.711±0.27
ENSMUST00000142722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.898±0.00 N/A N/A
ENSMUST00000144554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.710±0.00
ENSMUST00000153200 0.149±0.08 0.181±0.12 0.030±0.00 N/A 0.078±0.02 0.842±0.46 0.068±0.00 0.082±0.02 0.029±0.02 0.052±0.04 N/A 0.324±0.18 0.304±0.28 1.751±0.61
ENSMUST00000153906 N/A N/A N/A N/A N/A N/A 0.045±0.00 0.062±0.00 N/A N/A N/A 0.571±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IDA mRNA binding
GO:0017091 ISS AU-rich element binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045639 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) protein_coding Danio_rerio
ENSG00000162374 ELAVL4 ELAV like neuron-specific RNA binding protein 4 protein_coding Homo_sapiens

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