C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELAV like neuron-specific RNA binding protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162374 ELAVL4 9606 + 1:50048014-50203786 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357083 ELAVL4-002 50106292-50201399 protein_coding
  ENST00000371819 ELAVL4-006 50109706-50202294 protein_coding
  ENST00000371821 ELAVL4-005 50109626-50203054 protein_coding
  ENST00000371823 ELAVL4-004 50108966-50201402 protein_coding
  ENST00000371824 ELAVL4-003 50108933-50203786 protein_coding
  ENST00000371827 ELAVL4-001 50103910-50203770 protein_coding
  ENST00000448907 ELAVL4-201 50048014-50201868 protein_coding
  ENST00000463650 ELAVL4-010 50105690-50145184 processed_transcript
  ENST00000474675 ELAVL4-009 50177130-50197585 processed_transcript
  ENST00000492299 ELAVL4-008 50144953-50181300 processed_transcript
  ENST00000494555 ELAVL4-007 50109816-50145178 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000357083ENST00000371819ENST00000371821ENST00000371824ENST00000371827ENST00000448907ENST00000474675ENST00000492299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000357083 N/A N/A N/A 5.581±0.00 N/A 0.389±0.00 0.029±0.00 0.041±0.00 N/A N/A 0.065±0.00 1.381±0.56
ENST00000371819 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 0.006±0.00 0.026±0.00 N/A
ENST00000371821 N/A N/A N/A 2.217±0.00 0.186±0.00 0.660±0.00 N/A N/A N/A N/A 0.015±0.00 N/A
ENST00000371824 N/A N/A 0.067±0.00 2.906±1.53 N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A
ENST00000371827 N/A 0.012±0.00 N/A 6.678±2.03 0.047±0.00 0.368±0.24 N/A N/A 0.017±0.00 0.020±0.01 0.042±0.00 0.311±0.04
ENST00000448907 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474675 0.058±0.00 N/A N/A N/A 0.215±0.00 N/A N/A 0.502±0.00 N/A N/A N/A N/A
ENST00000492299 0.025±0.00 N/A N/A N/A N/A N/A 0.029±0.02 0.010±0.00 N/A 0.013±0.00 0.029±0.00 1.126±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000631 CIL_000631_0002 CGP 1:48727523-50203786
CIL_00063G CIL_00063G_0002 CGP 1:50048014-50423500

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS:IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0003730 TAS mRNA 3'-UTR binding
GO:0006396 TAS RNA processing
GO:0006397 TAS mRNA processing
GO:0017091 IDA AU-rich element binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045639 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) protein_coding Danio_rerio
ENSMUSG00000028546 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) protein_coding Mus_musculus

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